Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.22■□□□□ 0.83
RETP07949 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.22■□□□□ 0.83
RETP07949 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RETP07949 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RETP07949 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.21■□□□□ 0.83
RETP07949 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
RETP07949 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RETP07949 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RETP07949 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RETP07949 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.21■□□□□ 0.83
RETP07949 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RETP07949 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RETP07949 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.21■□□□□ 0.83
RETP07949 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.21■□□□□ 0.83
RETP07949 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
RETP07949 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RETP07949 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.21■□□□□ 0.83
RETP07949 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.21■□□□□ 0.83
RETP07949 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RETP07949 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RETP07949 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.21■□□□□ 0.83
RETP07949 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RETP07949 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.21■□□□□ 0.83
RETP07949 AC116050.2-201ENST00000612102 1779 ntBASIC20.21■□□□□ 0.83
RETP07949 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.2■□□□□ 0.83
RETP07949 AC087633.2-202ENST00000565166 1439 ntBASIC20.2■□□□□ 0.82
RETP07949 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RETP07949 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.2■□□□□ 0.82
RETP07949 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.2■□□□□ 0.82
RETP07949 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RETP07949 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RETP07949 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RETP07949 FAM197Y1-201ENST00000421178 764 ntBASIC20.2■□□□□ 0.82
RETP07949 KRT18P57-201ENST00000443599 1254 ntBASIC20.2■□□□□ 0.82
RETP07949 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.2■□□□□ 0.82
RETP07949 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RETP07949 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.2■□□□□ 0.82
RETP07949 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.2■□□□□ 0.82
RETP07949 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.2■□□□□ 0.82
RETP07949 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RETP07949 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
RETP07949 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.2■□□□□ 0.82
RETP07949 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RETP07949 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RETP07949 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RETP07949 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RETP07949 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RETP07949 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RETP07949 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RETP07949 LINC01568-207ENST00000641790 1380 ntBASIC20.2■□□□□ 0.82
RETP07949 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RETP07949 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
RETP07949 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RETP07949 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RETP07949 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RETP07949 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RETP07949 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
RETP07949 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.19■□□□□ 0.82
RETP07949 RBM17P1-201ENST00000453646 1190 ntBASIC20.19■□□□□ 0.82
RETP07949 KRT16P5-201ENST00000455284 522 ntBASIC20.19■□□□□ 0.82
RETP07949 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RETP07949 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.19■□□□□ 0.82
RETP07949 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RETP07949 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RETP07949 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.19■□□□□ 0.82
RETP07949 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RETP07949 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.19■□□□□ 0.82
RETP07949 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RETP07949 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.19■□□□□ 0.82
RETP07949 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RETP07949 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RETP07949 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RETP07949 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.19■□□□□ 0.82
RETP07949 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RETP07949 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RETP07949 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RETP07949 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RETP07949 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
RETP07949 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RETP07949 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.19■□□□□ 0.82
RETP07949 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RETP07949 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RETP07949 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RETP07949 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RETP07949 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RETP07949 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RETP07949 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.18■□□□□ 0.82
RETP07949 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.18■□□□□ 0.82
RETP07949 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RETP07949 AC073130.3-201ENST00000624389 2278 ntBASIC20.18■□□□□ 0.82
RETP07949 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RETP07949 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RETP07949 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RETP07949 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RETP07949 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RETP07949 UNC93B2-201ENST00000285383 730 ntBASIC20.18■□□□□ 0.82
RETP07949 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RETP07949 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RETP07949 PGM5P4-201ENST00000421970 445 ntBASIC20.18■□□□□ 0.82
RETP07949 AL137013.1-201ENST00000432946 1228 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms