Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 PTBP1P-201ENST00000554374 1601 ntBASIC24.01■■□□□ 1.43
APPP05067 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.01■■□□□ 1.43
APPP05067 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
APPP05067 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
APPP05067 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
APPP05067 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
APPP05067 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.01■■□□□ 1.43
APPP05067 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
APPP05067 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24■■□□□ 1.43
APPP05067 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
APPP05067 AIRN-201ENST00000601203 4374 ntBASIC24■■□□□ 1.43
APPP05067 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
APPP05067 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
APPP05067 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC24■■□□□ 1.43
APPP05067 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24■■□□□ 1.43
APPP05067 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC24■■□□□ 1.43
APPP05067 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
APPP05067 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
APPP05067 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC24■■□□□ 1.43
APPP05067 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24■■□□□ 1.43
APPP05067 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
APPP05067 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24■■□□□ 1.43
APPP05067 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
APPP05067 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
APPP05067 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
APPP05067 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
APPP05067 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC24■■□□□ 1.43
APPP05067 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC24■■□□□ 1.43
APPP05067 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.99■■□□□ 1.43
APPP05067 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
APPP05067 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
APPP05067 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
APPP05067 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.99■■□□□ 1.43
APPP05067 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
APPP05067 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC23.99■■□□□ 1.43
APPP05067 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
APPP05067 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
APPP05067 HLA-G-202ENST00000376815 851 ntBASIC23.99■■□□□ 1.43
APPP05067 HLA-G-203ENST00000376818 1127 ntBASIC23.99■■□□□ 1.43
APPP05067 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.99■■□□□ 1.43
APPP05067 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
APPP05067 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
APPP05067 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
APPP05067 AC008403.3-201ENST00000598924 454 ntBASIC23.99■■□□□ 1.43
APPP05067 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.99■■□□□ 1.43
APPP05067 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
APPP05067 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
APPP05067 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
APPP05067 AP005212.1-201ENST00000581547 1997 ntBASIC23.98■■□□□ 1.43
APPP05067 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
APPP05067 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
APPP05067 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
APPP05067 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.98■■□□□ 1.43
APPP05067 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.98■■□□□ 1.43
APPP05067 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.98■■□□□ 1.43
APPP05067 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.98■■□□□ 1.43
APPP05067 AC006058.3-201ENST00000606217 1069 ntBASIC23.98■■□□□ 1.43
APPP05067 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.98■■□□□ 1.43
APPP05067 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
APPP05067 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.98■■□□□ 1.43
APPP05067 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
APPP05067 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.98■■□□□ 1.43
APPP05067 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.98■■□□□ 1.43
APPP05067 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.97■■□□□ 1.43
APPP05067 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
APPP05067 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
APPP05067 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
APPP05067 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
APPP05067 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
APPP05067 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.97■■□□□ 1.43
APPP05067 KRT8P20-201ENST00000423953 1409 ntBASIC23.97■■□□□ 1.43
APPP05067 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
APPP05067 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
APPP05067 KRT8P17-201ENST00000453110 1448 ntBASIC23.97■■□□□ 1.43
APPP05067 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.97■■□□□ 1.43
APPP05067 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
APPP05067 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.97■■□□□ 1.43
APPP05067 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.97■■□□□ 1.43
APPP05067 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.97■■□□□ 1.43
APPP05067 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
APPP05067 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.97■■□□□ 1.43
APPP05067 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.97■■□□□ 1.43
APPP05067 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
APPP05067 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
APPP05067 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
APPP05067 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.96■■□□□ 1.43
APPP05067 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
APPP05067 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
APPP05067 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
APPP05067 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
APPP05067 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
APPP05067 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.96■■□□□ 1.43
APPP05067 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
APPP05067 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
APPP05067 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC23.96■■□□□ 1.43
APPP05067 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
APPP05067 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.96■■□□□ 1.43
APPP05067 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.96■■□□□ 1.43
APPP05067 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
APPP05067 AC008687.6-201ENST00000596318 630 ntBASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms