Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT6AP02538 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT6AP02538 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT6AP02538 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT6AP02538 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT6AP02538 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
KRT6AP02538 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
KRT6AP02538 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.38■□□□□ 0.69
KRT6AP02538 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT6AP02538 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.38■□□□□ 0.69
KRT6AP02538 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT6AP02538 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT6AP02538 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT6AP02538 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT6AP02538 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT6AP02538 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.38■□□□□ 0.69
KRT6AP02538 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT6AP02538 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT6AP02538 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KRT6AP02538 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.37■□□□□ 0.69
KRT6AP02538 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6AP02538 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
KRT6AP02538 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.37■□□□□ 0.69
KRT6AP02538 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6AP02538 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
KRT6AP02538 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.37■□□□□ 0.69
KRT6AP02538 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6AP02538 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6AP02538 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6AP02538 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6AP02538 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
KRT6AP02538 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6AP02538 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6AP02538 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KRT6AP02538 AC069236.1-201ENST00000604339 616 ntBASIC19.37■□□□□ 0.69
KRT6AP02538 BID-214ENST00000617586 542 ntTSL 5 BASIC19.37■□□□□ 0.69
KRT6AP02538 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
KRT6AP02538 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6AP02538 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.37■□□□□ 0.69
KRT6AP02538 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6AP02538 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT6AP02538 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.36■□□□□ 0.69
KRT6AP02538 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT6AP02538 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRT6AP02538 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.36■□□□□ 0.69
KRT6AP02538 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.36■□□□□ 0.69
KRT6AP02538 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
KRT6AP02538 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.36■□□□□ 0.69
KRT6AP02538 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
KRT6AP02538 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.36■□□□□ 0.69
KRT6AP02538 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT6AP02538 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.36■□□□□ 0.69
KRT6AP02538 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRT6AP02538 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
KRT6AP02538 MIR5787-201ENST00000611784 55 ntBASIC19.36■□□□□ 0.69
KRT6AP02538 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.36■□□□□ 0.69
KRT6AP02538 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRT6AP02538 AC008694.1-202ENST00000636953 945 ntBASIC19.36■□□□□ 0.69
KRT6AP02538 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRT6AP02538 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.36■□□□□ 0.69
KRT6AP02538 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
KRT6AP02538 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT6AP02538 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT6AP02538 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT6AP02538 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT6AP02538 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT6AP02538 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
KRT6AP02538 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT6AP02538 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
KRT6AP02538 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
KRT6AP02538 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT6AP02538 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT6AP02538 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
KRT6AP02538 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
KRT6AP02538 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.35■□□□□ 0.69
KRT6AP02538 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT6AP02538 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT6AP02538 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT6AP02538 AC231657.2-201ENST00000624556 255 ntBASIC19.35■□□□□ 0.69
KRT6AP02538 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT6AP02538 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.35■□□□□ 0.69
KRT6AP02538 TMEM179-206ENST00000616017 1645 ntBASIC19.35■□□□□ 0.69
KRT6AP02538 AL691432.2-201ENST00000607222 2038 ntBASIC19.35■□□□□ 0.69
KRT6AP02538 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
KRT6AP02538 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT6AP02538 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
KRT6AP02538 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KRT6AP02538 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
KRT6AP02538 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT6AP02538 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT6AP02538 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT6AP02538 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
KRT6AP02538 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRT6AP02538 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT6AP02538 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.34■□□□□ 0.69
KRT6AP02538 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT6AP02538 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT6AP02538 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
KRT6AP02538 KRT18P68-201ENST00000392293 1000 ntBASIC19.34■□□□□ 0.69
KRT6AP02538 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms