Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DRAP01903 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
HLA-DRAP01903 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DRAP01903 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DRAP01903 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DRAP01903 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.57■■□□□ 1.04
HLA-DRAP01903 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DRAP01903 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DRAP01903 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DRAP01903 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.57■■□□□ 1.04
HLA-DRAP01903 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.57■■□□□ 1.04
HLA-DRAP01903 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.57■■□□□ 1.04
HLA-DRAP01903 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.57■■□□□ 1.04
HLA-DRAP01903 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
HLA-DRAP01903 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DRAP01903 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DRAP01903 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DRAP01903 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DRAP01903 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.57■■□□□ 1.04
HLA-DRAP01903 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DRAP01903 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DRAP01903 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.56■■□□□ 1.04
HLA-DRAP01903 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DRAP01903 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DRAP01903 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
HLA-DRAP01903 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DRAP01903 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DRAP01903 HLA-G-202ENST00000376815 851 ntBASIC21.56■■□□□ 1.04
HLA-DRAP01903 HLA-G-203ENST00000376818 1127 ntBASIC21.56■■□□□ 1.04
HLA-DRAP01903 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.56■■□□□ 1.04
HLA-DRAP01903 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.56■■□□□ 1.04
HLA-DRAP01903 AC060766.5-201ENST00000590539 871 ntBASIC21.56■■□□□ 1.04
HLA-DRAP01903 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
HLA-DRAP01903 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DRAP01903 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DRAP01903 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DRAP01903 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DRAP01903 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DRAP01903 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DRAP01903 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
HLA-DRAP01903 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DRAP01903 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
HLA-DRAP01903 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DRAP01903 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DRAP01903 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DRAP01903 AC005829.2-201ENST00000571422 1056 ntBASIC21.55■■□□□ 1.04
HLA-DRAP01903 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DRAP01903 AC092368.3-202ENST00000574180 1591 ntBASIC21.55■■□□□ 1.04
HLA-DRAP01903 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
HLA-DRAP01903 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DRAP01903 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.55■■□□□ 1.04
HLA-DRAP01903 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.55■■□□□ 1.04
HLA-DRAP01903 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DRAP01903 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DRAP01903 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DRAP01903 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.55■■□□□ 1.04
HLA-DRAP01903 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DRAP01903 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DRAP01903 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
HLA-DRAP01903 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DRAP01903 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DRAP01903 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.54■■□□□ 1.04
HLA-DRAP01903 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.54■■□□□ 1.04
HLA-DRAP01903 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DRAP01903 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DRAP01903 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.54■■□□□ 1.04
HLA-DRAP01903 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.54■■□□□ 1.04
HLA-DRAP01903 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.54■■□□□ 1.04
HLA-DRAP01903 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DRAP01903 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.54■■□□□ 1.04
HLA-DRAP01903 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.54■■□□□ 1.04
HLA-DRAP01903 TCF3P1-201ENST00000423021 1937 ntBASIC21.54■■□□□ 1.04
HLA-DRAP01903 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DRAP01903 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DRAP01903 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.54■■□□□ 1.04
HLA-DRAP01903 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DRAP01903 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DRAP01903 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DRAP01903 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.54■■□□□ 1.04
HLA-DRAP01903 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRAP01903 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRAP01903 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRAP01903 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.53■■□□□ 1.04
HLA-DRAP01903 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.53■■□□□ 1.04
HLA-DRAP01903 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.53■■□□□ 1.04
HLA-DRAP01903 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRAP01903 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRAP01903 PNMA6B-201ENST00000538162 1200 ntBASIC21.53■■□□□ 1.04
HLA-DRAP01903 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRAP01903 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRAP01903 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
HLA-DRAP01903 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRAP01903 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.53■■□□□ 1.04
HLA-DRAP01903 AC006557.6-201ENST00000623071 864 ntBASIC21.53■■□□□ 1.04
HLA-DRAP01903 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.53■■□□□ 1.04
HLA-DRAP01903 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRAP01903 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRAP01903 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRAP01903 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRAP01903 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms