Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.81■■□□□ 1.08
TIMP1P01033 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.81■■□□□ 1.08
TIMP1P01033 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.81■■□□□ 1.08
TIMP1P01033 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.81■■□□□ 1.08
TIMP1P01033 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TIMP1P01033 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
TIMP1P01033 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.81■■□□□ 1.08
TIMP1P01033 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TIMP1P01033 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TIMP1P01033 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TIMP1P01033 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TIMP1P01033 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TIMP1P01033 AC242852.2-201ENST00000615738 1807 ntBASIC21.8■■□□□ 1.08
TIMP1P01033 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TIMP1P01033 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TIMP1P01033 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TIMP1P01033 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.8■■□□□ 1.08
TIMP1P01033 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TIMP1P01033 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TIMP1P01033 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TIMP1P01033 INGX-201ENST00000359239 846 ntBASIC21.8■■□□□ 1.08
TIMP1P01033 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TIMP1P01033 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.8■■□□□ 1.08
TIMP1P01033 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.8■■□□□ 1.08
TIMP1P01033 FAM8A6P-201ENST00000407496 1135 ntBASIC21.8■■□□□ 1.08
TIMP1P01033 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TIMP1P01033 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.8■■□□□ 1.08
TIMP1P01033 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.8■■□□□ 1.08
TIMP1P01033 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.8■■□□□ 1.08
TIMP1P01033 MYC-208ENST00000641036 567 ntBASIC21.8■■□□□ 1.08
TIMP1P01033 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TIMP1P01033 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.8■■□□□ 1.08
TIMP1P01033 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TIMP1P01033 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.8■■□□□ 1.08
TIMP1P01033 KRT8P20-201ENST00000423953 1409 ntBASIC21.8■■□□□ 1.08
TIMP1P01033 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.8■■□□□ 1.08
TIMP1P01033 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TIMP1P01033 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TIMP1P01033 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TIMP1P01033 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TIMP1P01033 AC117947.1-201ENST00000427448 529 ntBASIC21.79■■□□□ 1.08
TIMP1P01033 AC091390.4-202ENST00000476426 537 ntBASIC21.79■■□□□ 1.08
TIMP1P01033 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.79■■□□□ 1.08
TIMP1P01033 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.79■■□□□ 1.08
TIMP1P01033 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.79■■□□□ 1.08
TIMP1P01033 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TIMP1P01033 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TIMP1P01033 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TIMP1P01033 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TIMP1P01033 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TIMP1P01033 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.78■■□□□ 1.08
TIMP1P01033 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TIMP1P01033 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.78■■□□□ 1.08
TIMP1P01033 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TIMP1P01033 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TIMP1P01033 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.78■■□□□ 1.08
TIMP1P01033 AL031133.1-201ENST00000406807 723 ntBASIC21.78■■□□□ 1.08
TIMP1P01033 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TIMP1P01033 KRT18P56-201ENST00000507275 550 ntBASIC21.78■■□□□ 1.08
TIMP1P01033 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
TIMP1P01033 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TIMP1P01033 KRT126P-201ENST00000549467 1181 ntBASIC21.78■■□□□ 1.08
TIMP1P01033 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.78■■□□□ 1.08
TIMP1P01033 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.78■■□□□ 1.08
TIMP1P01033 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.78■■□□□ 1.08
TIMP1P01033 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TIMP1P01033 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TIMP1P01033 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TIMP1P01033 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TIMP1P01033 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TIMP1P01033 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TIMP1P01033 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TIMP1P01033 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
TIMP1P01033 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TIMP1P01033 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIMP1P01033 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIMP1P01033 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIMP1P01033 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIMP1P01033 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIMP1P01033 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.77■■□□□ 1.08
TIMP1P01033 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIMP1P01033 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.77■■□□□ 1.08
TIMP1P01033 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.77■■□□□ 1.08
TIMP1P01033 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
TIMP1P01033 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TIMP1P01033 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TIMP1P01033 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TIMP1P01033 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TIMP1P01033 AP006587.1-201ENST00000534129 1502 ntBASIC21.76■■□□□ 1.07
TIMP1P01033 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
TIMP1P01033 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
TIMP1P01033 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TIMP1P01033 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TIMP1P01033 HMGA1P5-201ENST00000412453 271 ntBASIC21.76■■□□□ 1.07
TIMP1P01033 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TIMP1P01033 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TIMP1P01033 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TIMP1P01033 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.76■■□□□ 1.07
TIMP1P01033 AL121894.2-201ENST00000602977 491 ntBASIC21.76■■□□□ 1.07
TIMP1P01033 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms