Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRUB2O95900 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.02■□□□□ 0.96
TRUB2O95900 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.02■□□□□ 0.96
TRUB2O95900 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.02■□□□□ 0.96
TRUB2O95900 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRUB2O95900 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRUB2O95900 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRUB2O95900 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.02■□□□□ 0.96
TRUB2O95900 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRUB2O95900 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRUB2O95900 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.02■□□□□ 0.95
TRUB2O95900 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRUB2O95900 PCDHAC2-203ENST00000615316 3011 ntBASIC21.02■□□□□ 0.95
TRUB2O95900 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.95
TRUB2O95900 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRUB2O95900 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TRUB2O95900 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRUB2O95900 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.01■□□□□ 0.95
TRUB2O95900 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.01■□□□□ 0.95
TRUB2O95900 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.01■□□□□ 0.95
TRUB2O95900 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRUB2O95900 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRUB2O95900 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRUB2O95900 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.01■□□□□ 0.95
TRUB2O95900 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRUB2O95900 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21■□□□□ 0.95
TRUB2O95900 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRUB2O95900 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB2O95900 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
TRUB2O95900 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB2O95900 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB2O95900 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
TRUB2O95900 TCF3P1-201ENST00000423021 1937 ntBASIC21■□□□□ 0.95
TRUB2O95900 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB2O95900 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB2O95900 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRUB2O95900 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB2O95900 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB2O95900 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21■□□□□ 0.95
TRUB2O95900 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21■□□□□ 0.95
TRUB2O95900 HLA-B-256ENST00000639848 1089 ntBASIC21■□□□□ 0.95
TRUB2O95900 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB2O95900 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRUB2O95900 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TRUB2O95900 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB2O95900 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB2O95900 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRUB2O95900 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TRUB2O95900 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRUB2O95900 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRUB2O95900 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.99■□□□□ 0.95
TRUB2O95900 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRUB2O95900 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TRUB2O95900 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRUB2O95900 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRUB2O95900 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRUB2O95900 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRUB2O95900 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRUB2O95900 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.99■□□□□ 0.95
TRUB2O95900 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
TRUB2O95900 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
TRUB2O95900 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.99■□□□□ 0.95
TRUB2O95900 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.99■□□□□ 0.95
TRUB2O95900 RNA5SP413-201ENST00000516373 109 ntBASIC20.99■□□□□ 0.95
TRUB2O95900 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.99■□□□□ 0.95
TRUB2O95900 AC060766.5-201ENST00000590539 871 ntBASIC20.99■□□□□ 0.95
TRUB2O95900 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.99■□□□□ 0.95
TRUB2O95900 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TRUB2O95900 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TRUB2O95900 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.99■□□□□ 0.95
TRUB2O95900 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRUB2O95900 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRUB2O95900 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRUB2O95900 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRUB2O95900 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.99■□□□□ 0.95
TRUB2O95900 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
TRUB2O95900 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRUB2O95900 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
TRUB2O95900 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
TRUB2O95900 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.98■□□□□ 0.95
TRUB2O95900 PTBP1P-201ENST00000554374 1601 ntBASIC20.98■□□□□ 0.95
TRUB2O95900 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.98■□□□□ 0.95
TRUB2O95900 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRUB2O95900 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRUB2O95900 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRUB2O95900 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRUB2O95900 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.98■□□□□ 0.95
TRUB2O95900 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRUB2O95900 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.98■□□□□ 0.95
TRUB2O95900 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.98■□□□□ 0.95
TRUB2O95900 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRUB2O95900 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRUB2O95900 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRUB2O95900 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB2O95900 AC092368.3-202ENST00000574180 1591 ntBASIC20.97■□□□□ 0.95
TRUB2O95900 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.97■□□□□ 0.95
TRUB2O95900 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB2O95900 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB2O95900 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB2O95900 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms