Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.78■□□□□ 0.44
CNOT4O95628 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CNOT4O95628 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT4O95628 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT4O95628 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT4O95628 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT4O95628 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.77■□□□□ 0.44
CNOT4O95628 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CNOT4O95628 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT4O95628 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CNOT4O95628 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT4O95628 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.77■□□□□ 0.44
CNOT4O95628 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT4O95628 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT4O95628 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CNOT4O95628 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.77■□□□□ 0.44
CNOT4O95628 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CNOT4O95628 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
CNOT4O95628 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT4O95628 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT4O95628 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT4O95628 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CNOT4O95628 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNOT4O95628 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CNOT4O95628 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.77■□□□□ 0.43
CNOT4O95628 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNOT4O95628 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CNOT4O95628 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT4O95628 RNF165-205ENST00000588679 2904 ntBASIC17.76■□□□□ 0.43
CNOT4O95628 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CNOT4O95628 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CNOT4O95628 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT4O95628 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT4O95628 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CNOT4O95628 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CNOT4O95628 RPS2P4-201ENST00000476944 856 ntBASIC17.76■□□□□ 0.43
CNOT4O95628 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.76■□□□□ 0.43
CNOT4O95628 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT4O95628 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT4O95628 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.76■□□□□ 0.43
CNOT4O95628 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT4O95628 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT4O95628 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT4O95628 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT4O95628 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.75■□□□□ 0.43
CNOT4O95628 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT4O95628 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.75■□□□□ 0.43
CNOT4O95628 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT4O95628 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.75■□□□□ 0.43
CNOT4O95628 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT4O95628 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CNOT4O95628 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.75■□□□□ 0.43
CNOT4O95628 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.75■□□□□ 0.43
CNOT4O95628 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.75■□□□□ 0.43
CNOT4O95628 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.75■□□□□ 0.43
CNOT4O95628 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.75■□□□□ 0.43
CNOT4O95628 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.75■□□□□ 0.43
CNOT4O95628 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CNOT4O95628 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT4O95628 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CNOT4O95628 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CNOT4O95628 FP700111.2-201ENST00000619190 1892 ntBASIC17.75■□□□□ 0.43
CNOT4O95628 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.75■□□□□ 0.43
CNOT4O95628 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.75■□□□□ 0.43
CNOT4O95628 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.75■□□□□ 0.43
CNOT4O95628 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT4O95628 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.74■□□□□ 0.43
CNOT4O95628 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CNOT4O95628 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.74■□□□□ 0.43
CNOT4O95628 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.74■□□□□ 0.43
CNOT4O95628 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CNOT4O95628 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CNOT4O95628 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT4O95628 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT4O95628 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT4O95628 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT4O95628 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT4O95628 AC128676.1-201ENST00000454392 318 ntBASIC17.74■□□□□ 0.43
CNOT4O95628 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.74■□□□□ 0.43
CNOT4O95628 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT4O95628 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT4O95628 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT4O95628 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CNOT4O95628 AC005229.4-201ENST00000610085 2198 ntBASIC17.74■□□□□ 0.43
CNOT4O95628 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT4O95628 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT4O95628 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CNOT4O95628 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.73■□□□□ 0.43
CNOT4O95628 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT4O95628 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT4O95628 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT4O95628 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.73■□□□□ 0.43
CNOT4O95628 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT4O95628 SLC25A24-204ENST00000569674 2357 ntBASIC17.73■□□□□ 0.43
CNOT4O95628 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT4O95628 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CNOT4O95628 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT4O95628 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT4O95628 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT4O95628 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms