Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCAF4O95104 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCAF4O95104 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCAF4O95104 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCAF4O95104 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SCAF4O95104 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.34■□□□□ 0.21
SCAF4O95104 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.34■□□□□ 0.21
SCAF4O95104 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.34■□□□□ 0.21
SCAF4O95104 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
SCAF4O95104 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.34■□□□□ 0.21
SCAF4O95104 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 BCL2-203ENST00000589955 5011 ntBASIC16.34■□□□□ 0.21
SCAF4O95104 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SCAF4O95104 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.34■□□□□ 0.21
SCAF4O95104 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.34■□□□□ 0.21
SCAF4O95104 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SCAF4O95104 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SCAF4O95104 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SCAF4O95104 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SCAF4O95104 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
SCAF4O95104 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCAF4O95104 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.34■□□□□ 0.21
SCAF4O95104 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.34■□□□□ 0.21
SCAF4O95104 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.33■□□□□ 0.21
SCAF4O95104 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SCAF4O95104 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SCAF4O95104 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.33■□□□□ 0.2
SCAF4O95104 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCAF4O95104 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCAF4O95104 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.33■□□□□ 0.2
SCAF4O95104 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SCAF4O95104 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SCAF4O95104 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.33■□□□□ 0.2
SCAF4O95104 AC012414.1-201ENST00000556676 535 ntBASIC16.33■□□□□ 0.2
SCAF4O95104 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.33■□□□□ 0.2
SCAF4O95104 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCAF4O95104 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCAF4O95104 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCAF4O95104 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCAF4O95104 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SCAF4O95104 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SCAF4O95104 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SCAF4O95104 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCAF4O95104 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.32■□□□□ 0.2
SCAF4O95104 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAF4O95104 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAF4O95104 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAF4O95104 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAF4O95104 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAF4O95104 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAF4O95104 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAF4O95104 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAF4O95104 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAF4O95104 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAF4O95104 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCAF4O95104 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAF4O95104 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAF4O95104 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.32■□□□□ 0.2
SCAF4O95104 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.32■□□□□ 0.2
SCAF4O95104 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.32■□□□□ 0.2
SCAF4O95104 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.32■□□□□ 0.2
SCAF4O95104 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAF4O95104 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.32■□□□□ 0.2
SCAF4O95104 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.32■□□□□ 0.2
SCAF4O95104 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.32■□□□□ 0.2
SCAF4O95104 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.32■□□□□ 0.2
SCAF4O95104 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAF4O95104 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SCAF4O95104 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAF4O95104 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAF4O95104 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SCAF4O95104 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCAF4O95104 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SCAF4O95104 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAF4O95104 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAF4O95104 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAF4O95104 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.31■□□□□ 0.2
SCAF4O95104 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.31■□□□□ 0.2
SCAF4O95104 AL354811.1-201ENST00000610286 706 ntBASIC16.31■□□□□ 0.2
SCAF4O95104 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAF4O95104 AL358852.1-201ENST00000623174 1268 ntBASIC16.31■□□□□ 0.2
SCAF4O95104 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
SCAF4O95104 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SCAF4O95104 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAF4O95104 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms