Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC31.45■■■□□ 2.62
PCF11O94913 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC31.45■■■□□ 2.62
PCF11O94913 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
PCF11O94913 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC31.44■■■□□ 2.62
PCF11O94913 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PCF11O94913 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC31.44■■■□□ 2.62
PCF11O94913 AP001412.1-201ENST00000608405 714 ntBASIC31.44■■■□□ 2.62
PCF11O94913 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
PCF11O94913 SRI-203ENST00000419179 1307 ntTSL 2 BASIC31.44■■■□□ 2.62
PCF11O94913 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
PCF11O94913 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC31.44■■■□□ 2.62
PCF11O94913 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PCF11O94913 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PCF11O94913 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC31.43■■■□□ 2.62
PCF11O94913 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC31.43■■■□□ 2.62
PCF11O94913 C1QL1P1-201ENST00000568105 661 ntBASIC31.43■■■□□ 2.62
PCF11O94913 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC31.43■■■□□ 2.62
PCF11O94913 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PCF11O94913 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC31.43■■■□□ 2.62
PCF11O94913 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
PCF11O94913 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC31.43■■■□□ 2.62
PCF11O94913 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC31.43■■■□□ 2.62
PCF11O94913 DPP3P2-201ENST00000416030 1696 ntBASIC31.43■■■□□ 2.62
PCF11O94913 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
PCF11O94913 ARMC10P1-201ENST00000313754 855 ntBASIC31.43■■■□□ 2.62
PCF11O94913 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
PCF11O94913 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC31.43■■■□□ 2.62
PCF11O94913 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC31.43■■■□□ 2.62
PCF11O94913 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC31.43■■■□□ 2.62
PCF11O94913 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
PCF11O94913 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PCF11O94913 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
PCF11O94913 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC31.42■■■□□ 2.62
PCF11O94913 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
PCF11O94913 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PCF11O94913 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
PCF11O94913 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC31.42■■■□□ 2.62
PCF11O94913 FP700111.2-201ENST00000619190 1892 ntBASIC31.42■■■□□ 2.62
PCF11O94913 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC31.42■■■□□ 2.62
PCF11O94913 SAPCD2P4-201ENST00000424595 1171 ntBASIC31.42■■■□□ 2.62
PCF11O94913 AP003071.4-201ENST00000562276 1284 ntBASIC31.42■■■□□ 2.62
PCF11O94913 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC31.42■■■□□ 2.62
PCF11O94913 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC31.42■■■□□ 2.62
PCF11O94913 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
PCF11O94913 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC31.41■■■□□ 2.62
PCF11O94913 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PCF11O94913 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
PCF11O94913 NIFKP9-201ENST00000419265 221 ntBASIC31.41■■■□□ 2.62
PCF11O94913 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC31.41■■■□□ 2.62
PCF11O94913 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC31.41■■■□□ 2.62
PCF11O94913 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PCF11O94913 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC31.41■■■□□ 2.62
PCF11O94913 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PCF11O94913 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC31.41■■■□□ 2.62
PCF11O94913 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
PCF11O94913 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PCF11O94913 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PCF11O94913 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PCF11O94913 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC31.4■■■□□ 2.62
PCF11O94913 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
PCF11O94913 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PCF11O94913 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC31.4■■■□□ 2.62
PCF11O94913 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC31.4■■■□□ 2.62
PCF11O94913 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC31.4■■■□□ 2.62
PCF11O94913 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC31.4■■■□□ 2.62
PCF11O94913 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PCF11O94913 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC31.4■■■□□ 2.62
PCF11O94913 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC31.4■■■□□ 2.62
PCF11O94913 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PCF11O94913 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PCF11O94913 CALM3-202ENST00000391918 702 ntTSL 2 BASIC31.39■■■□□ 2.62
PCF11O94913 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
PCF11O94913 FAM197Y1-201ENST00000421178 764 ntBASIC31.39■■■□□ 2.62
PCF11O94913 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PCF11O94913 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC31.39■■■□□ 2.62
PCF11O94913 KRT17P2-201ENST00000300992 1314 ntBASIC31.39■■■□□ 2.62
PCF11O94913 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PCF11O94913 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PCF11O94913 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
PCF11O94913 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
PCF11O94913 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC31.39■■■□□ 2.61
PCF11O94913 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
PCF11O94913 REXO1L10P-201ENST00000615707 1290 ntBASIC31.39■■■□□ 2.61
PCF11O94913 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
PCF11O94913 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PCF11O94913 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
PCF11O94913 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PCF11O94913 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC31.38■■■□□ 2.61
PCF11O94913 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
PCF11O94913 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PCF11O94913 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PCF11O94913 RNF146-204ENST00000476956 884 ntTSL 2 BASIC31.38■■■□□ 2.61
PCF11O94913 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
PCF11O94913 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC31.37■■■□□ 2.61
PCF11O94913 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PCF11O94913 AC079834.2-201ENST00000609776 1949 ntBASIC31.37■■■□□ 2.61
PCF11O94913 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC31.37■■■□□ 2.61
PCF11O94913 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PCF11O94913 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PCF11O94913 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms