Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP200O75643 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SNRNP200O75643 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.21■□□□□ 0.67
SNRNP200O75643 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.21■□□□□ 0.67
SNRNP200O75643 AC120498.8-201ENST00000614275 531 ntBASIC19.21■□□□□ 0.67
SNRNP200O75643 AC112907.3-201ENST00000577781 2400 ntBASIC19.21■□□□□ 0.67
SNRNP200O75643 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.21■□□□□ 0.67
SNRNP200O75643 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP200O75643 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP200O75643 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP200O75643 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.21■□□□□ 0.67
SNRNP200O75643 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.21■□□□□ 0.67
SNRNP200O75643 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP200O75643 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP200O75643 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP200O75643 AC020907.5-201ENST00000624372 1936 ntBASIC19.21■□□□□ 0.67
SNRNP200O75643 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP200O75643 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.21■□□□□ 0.67
SNRNP200O75643 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP200O75643 AC023632.3-201ENST00000521633 145 ntBASIC19.21■□□□□ 0.67
SNRNP200O75643 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP200O75643 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNRNP200O75643 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP200O75643 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP200O75643 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP200O75643 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP200O75643 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SNRNP200O75643 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP200O75643 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP200O75643 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.2■□□□□ 0.66
SNRNP200O75643 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.2■□□□□ 0.66
SNRNP200O75643 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.2■□□□□ 0.66
SNRNP200O75643 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.2■□□□□ 0.66
SNRNP200O75643 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.2■□□□□ 0.66
SNRNP200O75643 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.2■□□□□ 0.66
SNRNP200O75643 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP200O75643 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SNRNP200O75643 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP200O75643 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SNRNP200O75643 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SNRNP200O75643 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SNRNP200O75643 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP200O75643 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP200O75643 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP200O75643 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP200O75643 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNRNP200O75643 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.2■□□□□ 0.66
SNRNP200O75643 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.19■□□□□ 0.66
SNRNP200O75643 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRNP200O75643 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SNRNP200O75643 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRNP200O75643 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.19■□□□□ 0.66
SNRNP200O75643 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.19■□□□□ 0.66
SNRNP200O75643 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.19■□□□□ 0.66
SNRNP200O75643 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SNRNP200O75643 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.19■□□□□ 0.66
SNRNP200O75643 AC006557.6-201ENST00000623071 864 ntBASIC19.19■□□□□ 0.66
SNRNP200O75643 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SNRNP200O75643 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
SNRNP200O75643 AL162377.1-201ENST00000618844 1793 ntBASIC19.19■□□□□ 0.66
SNRNP200O75643 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.19■□□□□ 0.66
SNRNP200O75643 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
SNRNP200O75643 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.19■□□□□ 0.66
SNRNP200O75643 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.19■□□□□ 0.66
SNRNP200O75643 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRNP200O75643 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRNP200O75643 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRNP200O75643 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNRNP200O75643 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNRNP200O75643 AC093827.2-201ENST00000512654 315 ntBASIC19.19■□□□□ 0.66
SNRNP200O75643 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
SNRNP200O75643 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.19■□□□□ 0.66
SNRNP200O75643 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
SNRNP200O75643 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.19■□□□□ 0.66
SNRNP200O75643 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.18■□□□□ 0.66
SNRNP200O75643 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNRNP200O75643 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.18■□□□□ 0.66
SNRNP200O75643 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.18■□□□□ 0.66
SNRNP200O75643 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNRNP200O75643 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNRNP200O75643 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNRNP200O75643 C1QBPP2-201ENST00000528754 825 ntBASIC19.18■□□□□ 0.66
SNRNP200O75643 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.18■□□□□ 0.66
SNRNP200O75643 AC073648.6-201ENST00000641589 218 ntBASIC19.18■□□□□ 0.66
SNRNP200O75643 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SNRNP200O75643 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNRNP200O75643 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.18■□□□□ 0.66
SNRNP200O75643 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNRNP200O75643 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNRNP200O75643 AC099778.1-201ENST00000568593 1911 ntBASIC19.18■□□□□ 0.66
SNRNP200O75643 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SNRNP200O75643 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNRNP200O75643 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.18■□□□□ 0.66
SNRNP200O75643 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNRNP200O75643 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SNRNP200O75643 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SNRNP200O75643 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNRNP200O75643 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.18■□□□□ 0.66
SNRNP200O75643 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.18■□□□□ 0.66
SNRNP200O75643 KRT8P17-201ENST00000453110 1448 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms