Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A3O75365 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.05■□□□□ 0.48
PTP4A3O75365 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A3O75365 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.05■□□□□ 0.48
PTP4A3O75365 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PTP4A3O75365 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.04■□□□□ 0.48
PTP4A3O75365 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A3O75365 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A3O75365 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.04■□□□□ 0.48
PTP4A3O75365 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.04■□□□□ 0.48
PTP4A3O75365 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A3O75365 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A3O75365 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PTP4A3O75365 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A3O75365 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A3O75365 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.04■□□□□ 0.48
PTP4A3O75365 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A3O75365 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.04■□□□□ 0.48
PTP4A3O75365 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.04■□□□□ 0.48
PTP4A3O75365 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A3O75365 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A3O75365 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A3O75365 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.04■□□□□ 0.48
PTP4A3O75365 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.04■□□□□ 0.48
PTP4A3O75365 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.04■□□□□ 0.48
PTP4A3O75365 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A3O75365 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A3O75365 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A3O75365 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.04■□□□□ 0.48
PTP4A3O75365 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A3O75365 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A3O75365 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A3O75365 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A3O75365 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PTP4A3O75365 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A3O75365 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A3O75365 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
PTP4A3O75365 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A3O75365 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.03■□□□□ 0.48
PTP4A3O75365 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.03■□□□□ 0.48
PTP4A3O75365 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A3O75365 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.03■□□□□ 0.48
PTP4A3O75365 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.03■□□□□ 0.48
PTP4A3O75365 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.03■□□□□ 0.48
PTP4A3O75365 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A3O75365 AC009237.14-201ENST00000609975 1594 ntBASIC18.03■□□□□ 0.48
PTP4A3O75365 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A3O75365 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A3O75365 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PTP4A3O75365 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A3O75365 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTP4A3O75365 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
PTP4A3O75365 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTP4A3O75365 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PTP4A3O75365 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.02■□□□□ 0.48
PTP4A3O75365 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.02■□□□□ 0.48
PTP4A3O75365 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.02■□□□□ 0.48
PTP4A3O75365 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PTP4A3O75365 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.02■□□□□ 0.48
PTP4A3O75365 KRT18P68-201ENST00000392293 1000 ntBASIC18.02■□□□□ 0.48
PTP4A3O75365 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.02■□□□□ 0.48
PTP4A3O75365 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.02■□□□□ 0.48
PTP4A3O75365 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTP4A3O75365 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.02■□□□□ 0.48
PTP4A3O75365 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTP4A3O75365 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.02■□□□□ 0.47
PTP4A3O75365 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTP4A3O75365 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PTP4A3O75365 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.02■□□□□ 0.47
PTP4A3O75365 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A3O75365 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A3O75365 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PTP4A3O75365 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PTP4A3O75365 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PTP4A3O75365 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.01■□□□□ 0.47
PTP4A3O75365 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A3O75365 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A3O75365 AC006015.1-201ENST00000429970 570 ntBASIC18.01■□□□□ 0.47
PTP4A3O75365 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A3O75365 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.01■□□□□ 0.47
PTP4A3O75365 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PTP4A3O75365 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.01■□□□□ 0.47
PTP4A3O75365 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.01■□□□□ 0.47
PTP4A3O75365 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.01■□□□□ 0.47
PTP4A3O75365 AC011767.1-201ENST00000617410 1153 ntBASIC18.01■□□□□ 0.47
PTP4A3O75365 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A3O75365 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A3O75365 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A3O75365 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A3O75365 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A3O75365 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTP4A3O75365 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PTP4A3O75365 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTP4A3O75365 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTP4A3O75365 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
PTP4A3O75365 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PTP4A3O75365 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTP4A3O75365 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTP4A3O75365 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTP4A3O75365 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms