Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL41O60662 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.81■□□□□ 0.76
KLHL41O60662 SLC29A4P1-201ENST00000398760 971 ntBASIC19.81■□□□□ 0.76
KLHL41O60662 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
KLHL41O60662 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL41O60662 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.81■□□□□ 0.76
KLHL41O60662 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.81■□□□□ 0.76
KLHL41O60662 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
KLHL41O60662 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL41O60662 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.81■□□□□ 0.76
KLHL41O60662 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL41O60662 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL41O60662 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL41O60662 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL41O60662 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL41O60662 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
KLHL41O60662 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL41O60662 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL41O60662 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.8■□□□□ 0.76
KLHL41O60662 AC018445.3-201ENST00000624177 1945 ntBASIC19.8■□□□□ 0.76
KLHL41O60662 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL41O60662 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
KLHL41O60662 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL41O60662 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL41O60662 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL41O60662 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.8■□□□□ 0.76
KLHL41O60662 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
KLHL41O60662 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
KLHL41O60662 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.8■□□□□ 0.76
KLHL41O60662 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.8■□□□□ 0.76
KLHL41O60662 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.8■□□□□ 0.76
KLHL41O60662 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.8■□□□□ 0.76
KLHL41O60662 AC138907.5-202ENST00000569484 235 ntBASIC19.8■□□□□ 0.76
KLHL41O60662 AC005181.1-201ENST00000604782 1256 ntBASIC19.8■□□□□ 0.76
KLHL41O60662 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.8■□□□□ 0.76
KLHL41O60662 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL41O60662 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL41O60662 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL41O60662 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL41O60662 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL41O60662 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL41O60662 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL41O60662 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL41O60662 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL41O60662 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL41O60662 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL41O60662 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL41O60662 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL41O60662 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
KLHL41O60662 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL41O60662 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL41O60662 AC098818.2-201ENST00000564925 2320 ntBASIC19.79■□□□□ 0.76
KLHL41O60662 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL41O60662 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL41O60662 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.79■□□□□ 0.76
KLHL41O60662 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
KLHL41O60662 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.79■□□□□ 0.76
KLHL41O60662 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL41O60662 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
KLHL41O60662 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.79■□□□□ 0.76
KLHL41O60662 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.79■□□□□ 0.76
KLHL41O60662 DUX4L16-201ENST00000555130 1264 ntBASIC19.79■□□□□ 0.76
KLHL41O60662 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.79■□□□□ 0.76
KLHL41O60662 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.79■□□□□ 0.76
KLHL41O60662 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.79■□□□□ 0.76
KLHL41O60662 UBE2DNL-204ENST00000602536 740 ntBASIC19.79■□□□□ 0.76
KLHL41O60662 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.79■□□□□ 0.76
KLHL41O60662 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
KLHL41O60662 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
KLHL41O60662 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
KLHL41O60662 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.79■□□□□ 0.76
KLHL41O60662 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL41O60662 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL41O60662 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL41O60662 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.79■□□□□ 0.76
KLHL41O60662 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
KLHL41O60662 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.79■□□□□ 0.76
KLHL41O60662 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
KLHL41O60662 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL41O60662 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL41O60662 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL41O60662 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.78■□□□□ 0.76
KLHL41O60662 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL41O60662 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL41O60662 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.78■□□□□ 0.76
KLHL41O60662 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL41O60662 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL41O60662 AC010141.2-201ENST00000452426 721 ntBASIC19.78■□□□□ 0.76
KLHL41O60662 AC083906.2-201ENST00000511578 360 ntBASIC19.78■□□□□ 0.76
KLHL41O60662 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.78■□□□□ 0.76
KLHL41O60662 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.78■□□□□ 0.76
KLHL41O60662 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.78■□□□□ 0.76
KLHL41O60662 SLC7A5P1-201ENST00000568957 537 ntBASIC19.78■□□□□ 0.76
KLHL41O60662 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL41O60662 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL41O60662 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.78■□□□□ 0.76
KLHL41O60662 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
KLHL41O60662 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL41O60662 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL41O60662 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms