Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
EXTL3O43909 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.76■■□□□ 1.07
EXTL3O43909 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
EXTL3O43909 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
EXTL3O43909 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.76■■□□□ 1.07
EXTL3O43909 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.76■■□□□ 1.07
EXTL3O43909 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EXTL3O43909 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EXTL3O43909 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.76■■□□□ 1.07
EXTL3O43909 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
EXTL3O43909 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.76■■□□□ 1.07
EXTL3O43909 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EXTL3O43909 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EXTL3O43909 SOX15-203ENST00000570788 1093 ntBASIC21.76■■□□□ 1.07
EXTL3O43909 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EXTL3O43909 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.76■■□□□ 1.07
EXTL3O43909 AC099778.1-201ENST00000568593 1911 ntBASIC21.76■■□□□ 1.07
EXTL3O43909 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
EXTL3O43909 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
EXTL3O43909 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EXTL3O43909 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EXTL3O43909 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
EXTL3O43909 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
EXTL3O43909 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.76■■□□□ 1.07
EXTL3O43909 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EXTL3O43909 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EXTL3O43909 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
EXTL3O43909 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
EXTL3O43909 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
EXTL3O43909 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EXTL3O43909 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.75■■□□□ 1.07
EXTL3O43909 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EXTL3O43909 KRT16P6-202ENST00000425692 1426 ntBASIC21.75■■□□□ 1.07
EXTL3O43909 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
EXTL3O43909 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EXTL3O43909 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EXTL3O43909 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.75■■□□□ 1.07
EXTL3O43909 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.75■■□□□ 1.07
EXTL3O43909 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
EXTL3O43909 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
EXTL3O43909 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EXTL3O43909 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.75■■□□□ 1.07
EXTL3O43909 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EXTL3O43909 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EXTL3O43909 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
EXTL3O43909 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.75■■□□□ 1.07
EXTL3O43909 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EXTL3O43909 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXTL3O43909 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EXTL3O43909 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXTL3O43909 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXTL3O43909 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXTL3O43909 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXTL3O43909 UNC93B4-201ENST00000505679 747 ntBASIC21.74■■□□□ 1.07
EXTL3O43909 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.74■■□□□ 1.07
EXTL3O43909 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.74■■□□□ 1.07
EXTL3O43909 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EXTL3O43909 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXTL3O43909 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXTL3O43909 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXTL3O43909 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.74■■□□□ 1.07
EXTL3O43909 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.73■■□□□ 1.07
EXTL3O43909 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EXTL3O43909 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.73■■□□□ 1.07
EXTL3O43909 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.73■■□□□ 1.07
EXTL3O43909 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
EXTL3O43909 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.73■■□□□ 1.07
EXTL3O43909 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.73■■□□□ 1.07
EXTL3O43909 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
EXTL3O43909 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
EXTL3O43909 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EXTL3O43909 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.73■■□□□ 1.07
EXTL3O43909 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.73■■□□□ 1.07
EXTL3O43909 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
EXTL3O43909 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
EXTL3O43909 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.73■■□□□ 1.07
EXTL3O43909 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EXTL3O43909 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EXTL3O43909 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.73■■□□□ 1.07
EXTL3O43909 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
EXTL3O43909 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.73■■□□□ 1.07
EXTL3O43909 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EXTL3O43909 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
EXTL3O43909 AL391422.3-201ENST00000603791 2761 ntBASIC21.73■■□□□ 1.07
EXTL3O43909 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.73■■□□□ 1.07
EXTL3O43909 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
EXTL3O43909 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EXTL3O43909 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EXTL3O43909 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EXTL3O43909 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EXTL3O43909 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.72■■□□□ 1.07
EXTL3O43909 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EXTL3O43909 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
EXTL3O43909 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
EXTL3O43909 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EXTL3O43909 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EXTL3O43909 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EXTL3O43909 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.72■■□□□ 1.07
EXTL3O43909 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
EXTL3O43909 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms