Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF13O43567 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RNF13O43567 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF13O43567 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RNF13O43567 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
RNF13O43567 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
RNF13O43567 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF13O43567 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.21■□□□□ 0.5
RNF13O43567 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.21■□□□□ 0.5
RNF13O43567 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF13O43567 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF13O43567 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF13O43567 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RNF13O43567 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF13O43567 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF13O43567 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF13O43567 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF13O43567 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF13O43567 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF13O43567 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF13O43567 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.2■□□□□ 0.5
RNF13O43567 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF13O43567 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF13O43567 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF13O43567 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF13O43567 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF13O43567 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF13O43567 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RNF13O43567 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF13O43567 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RNF13O43567 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF13O43567 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF13O43567 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF13O43567 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF13O43567 CYP21A1P-202ENST00000354927 1481 ntBASIC18.2■□□□□ 0.5
RNF13O43567 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF13O43567 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF13O43567 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.19■□□□□ 0.5
RNF13O43567 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF13O43567 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF13O43567 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF13O43567 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RNF13O43567 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF13O43567 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF13O43567 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF13O43567 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF13O43567 CNN2P6-201ENST00000439038 900 ntBASIC18.19■□□□□ 0.5
RNF13O43567 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.19■□□□□ 0.5
RNF13O43567 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RNF13O43567 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF13O43567 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF13O43567 AC087633.2-202ENST00000565166 1439 ntBASIC18.19■□□□□ 0.5
RNF13O43567 AC022517.1-201ENST00000592429 346 ntBASIC18.19■□□□□ 0.5
RNF13O43567 AL356652.1-201ENST00000615962 565 ntBASIC18.19■□□□□ 0.5
RNF13O43567 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.19■□□□□ 0.5
RNF13O43567 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF13O43567 TCF3P1-201ENST00000423021 1937 ntBASIC18.19■□□□□ 0.5
RNF13O43567 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF13O43567 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.19■□□□□ 0.5
RNF13O43567 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RNF13O43567 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF13O43567 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF13O43567 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
RNF13O43567 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF13O43567 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF13O43567 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RNF13O43567 AC068338.2-201ENST00000563278 1430 ntBASIC18.18■□□□□ 0.5
RNF13O43567 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF13O43567 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF13O43567 MIR935-201ENST00000401179 91 ntBASIC18.18■□□□□ 0.5
RNF13O43567 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.18■□□□□ 0.5
RNF13O43567 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.18■□□□□ 0.5
RNF13O43567 AC231657.2-201ENST00000624556 255 ntBASIC18.18■□□□□ 0.5
RNF13O43567 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF13O43567 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF13O43567 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF13O43567 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF13O43567 DPP3P2-201ENST00000416030 1696 ntBASIC18.18■□□□□ 0.5
RNF13O43567 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF13O43567 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF13O43567 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF13O43567 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF13O43567 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RNF13O43567 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF13O43567 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RNF13O43567 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RNF13O43567 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF13O43567 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF13O43567 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF13O43567 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
RNF13O43567 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RNF13O43567 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RNF13O43567 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF13O43567 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF13O43567 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF13O43567 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF13O43567 AC007322.1-201ENST00000426983 750 ntBASIC18.17■□□□□ 0.5
RNF13O43567 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.17■□□□□ 0.5
RNF13O43567 RARRES2P4-201ENST00000514074 484 ntBASIC18.17■□□□□ 0.5
RNF13O43567 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms