Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CHD1O14646 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC32.79■■■□□ 2.84
CHD1O14646 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
CHD1O14646 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC32.79■■■□□ 2.84
CHD1O14646 AC080038.3-201ENST00000623346 1952 ntBASIC32.79■■■□□ 2.84
CHD1O14646 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
CHD1O14646 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC32.78■■■□□ 2.84
CHD1O14646 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC32.78■■■□□ 2.84
CHD1O14646 AC096733.2-201ENST00000609937 1394 ntBASIC32.78■■■□□ 2.84
CHD1O14646 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC32.78■■■□□ 2.84
CHD1O14646 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC32.78■■■□□ 2.84
CHD1O14646 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
CHD1O14646 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
CHD1O14646 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
CHD1O14646 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
CHD1O14646 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
CHD1O14646 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CHD1O14646 AC011558.1-201ENST00000623459 338 ntBASIC32.77■■■□□ 2.84
CHD1O14646 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CHD1O14646 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CHD1O14646 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CHD1O14646 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC32.77■■■□□ 2.84
CHD1O14646 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CHD1O14646 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CHD1O14646 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
CHD1O14646 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
CHD1O14646 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
CHD1O14646 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC32.76■■■□□ 2.84
CHD1O14646 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC32.76■■■□□ 2.83
CHD1O14646 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
CHD1O14646 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.83
CHD1O14646 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC32.76■■■□□ 2.83
CHD1O14646 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
CHD1O14646 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC32.76■■■□□ 2.83
CHD1O14646 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
CHD1O14646 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
CHD1O14646 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC32.75■■■□□ 2.83
CHD1O14646 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CHD1O14646 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
CHD1O14646 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC32.75■■■□□ 2.83
CHD1O14646 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
CHD1O14646 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC32.75■■■□□ 2.83
CHD1O14646 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC32.75■■■□□ 2.83
CHD1O14646 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
CHD1O14646 AL441883.1-201ENST00000566170 1045 ntBASIC32.75■■■□□ 2.83
CHD1O14646 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CHD1O14646 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CHD1O14646 RCC2P6-201ENST00000526625 1557 ntBASIC32.75■■■□□ 2.83
CHD1O14646 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CHD1O14646 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CHD1O14646 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC32.74■■■□□ 2.83
CHD1O14646 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
CHD1O14646 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC32.74■■■□□ 2.83
CHD1O14646 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC32.74■■■□□ 2.83
CHD1O14646 AC010653.2-201ENST00000623505 997 ntBASIC32.74■■■□□ 2.83
CHD1O14646 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CHD1O14646 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC32.74■■■□□ 2.83
CHD1O14646 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CHD1O14646 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CHD1O14646 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
CHD1O14646 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CHD1O14646 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC32.74■■■□□ 2.83
CHD1O14646 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC32.74■■■□□ 2.83
CHD1O14646 AL023973.1-201ENST00000624619 620 ntBASIC32.74■■■□□ 2.83
CHD1O14646 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
CHD1O14646 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC32.73■■■□□ 2.83
CHD1O14646 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC32.73■■■□□ 2.83
CHD1O14646 MFAP1P1-201ENST00000442257 1255 ntBASIC32.73■■■□□ 2.83
CHD1O14646 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC32.73■■■□□ 2.83
CHD1O14646 PTK2-216ENST00000519881 863 ntTSL 3 BASIC32.73■■■□□ 2.83
CHD1O14646 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC32.73■■■□□ 2.83
CHD1O14646 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC32.73■■■□□ 2.83
CHD1O14646 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CHD1O14646 RN7SL510P-201ENST00000581311 263 ntBASIC32.73■■■□□ 2.83
CHD1O14646 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
CHD1O14646 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC32.73■■■□□ 2.83
CHD1O14646 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CHD1O14646 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CHD1O14646 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC32.72■■■□□ 2.83
CHD1O14646 KRT8P45-201ENST00000414328 1447 ntBASIC32.72■■■□□ 2.83
CHD1O14646 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC32.72■■■□□ 2.83
CHD1O14646 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CHD1O14646 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CHD1O14646 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC32.72■■■□□ 2.83
CHD1O14646 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CHD1O14646 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC32.72■■■□□ 2.83
CHD1O14646 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC32.72■■■□□ 2.83
CHD1O14646 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
CHD1O14646 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC32.72■■■□□ 2.83
CHD1O14646 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC32.72■■■□□ 2.83
CHD1O14646 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
CHD1O14646 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
CHD1O14646 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC32.72■■■□□ 2.83
CHD1O14646 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CHD1O14646 ATP5G2P1-201ENST00000433580 426 ntBASIC32.71■■■□□ 2.83
CHD1O14646 VENTXP5-201ENST00000523979 775 ntBASIC32.71■■■□□ 2.83
CHD1O14646 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC32.71■■■□□ 2.83
CHD1O14646 GPALPP1-207ENST00000611650 899 ntBASIC32.71■■■□□ 2.83
CHD1O14646 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CHD1O14646 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms