Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
H3BM21 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
H3BM21 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.93■□□□□ 0.78
H3BM21 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H3BM21 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
H3BM21 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.93■□□□□ 0.78
H3BM21 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.93■□□□□ 0.78
H3BM21 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
H3BM21 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.93■□□□□ 0.78
H3BM21 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.93■□□□□ 0.78
H3BM21 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
H3BM21 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
H3BM21 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.93■□□□□ 0.78
H3BM21 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.93■□□□□ 0.78
H3BM21 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
H3BM21 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.93■□□□□ 0.78
H3BM21 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.93■□□□□ 0.78
H3BM21 AC120498.8-201ENST00000614275 531 ntBASIC19.93■□□□□ 0.78
H3BM21 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
H3BM21 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H3BM21 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
H3BM21 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.93■□□□□ 0.78
H3BM21 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
H3BM21 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
H3BM21 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
H3BM21 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
H3BM21 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H3BM21 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
H3BM21 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3BM21 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
H3BM21 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3BM21 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3BM21 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3BM21 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
H3BM21 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.92■□□□□ 0.78
H3BM21 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
H3BM21 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.92■□□□□ 0.78
H3BM21 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
H3BM21 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3BM21 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.92■□□□□ 0.78
H3BM21 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.92■□□□□ 0.78
H3BM21 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.92■□□□□ 0.78
H3BM21 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.92■□□□□ 0.78
H3BM21 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.92■□□□□ 0.78
H3BM21 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.92■□□□□ 0.78
H3BM21 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.92■□□□□ 0.78
H3BM21 AC006557.6-201ENST00000623071 864 ntBASIC19.92■□□□□ 0.78
H3BM21 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3BM21 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3BM21 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3BM21 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
H3BM21 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3BM21 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3BM21 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3BM21 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
H3BM21 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3BM21 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3BM21 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
H3BM21 AC239809.2-201ENST00000415381 517 ntBASIC19.91■□□□□ 0.78
H3BM21 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.91■□□□□ 0.78
H3BM21 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
H3BM21 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3BM21 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
H3BM21 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.91■□□□□ 0.78
H3BM21 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
H3BM21 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
H3BM21 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3BM21 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
H3BM21 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.91■□□□□ 0.78
H3BM21 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3BM21 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
H3BM21 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3BM21 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.91■□□□□ 0.78
H3BM21 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
H3BM21 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3BM21 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.91■□□□□ 0.78
H3BM21 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
H3BM21 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H3BM21 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H3BM21 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
H3BM21 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H3BM21 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H3BM21 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
H3BM21 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H3BM21 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
H3BM21 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.9■□□□□ 0.78
H3BM21 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
H3BM21 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.9■□□□□ 0.78
H3BM21 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
H3BM21 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
H3BM21 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
H3BM21 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
H3BM21 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
H3BM21 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
H3BM21 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
H3BM21 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
H3BM21 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
H3BM21 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
H3BM21 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H3BM21 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms