Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RNF223E7ERA6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
RNF223E7ERA6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF223E7ERA6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RNF223E7ERA6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF223E7ERA6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF223E7ERA6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF223E7ERA6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF223E7ERA6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF223E7ERA6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF223E7ERA6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF223E7ERA6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RNF223E7ERA6 CYP2D8P-201ENST00000433633 1490 ntBASIC16.66■□□□□ 0.26
RNF223E7ERA6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RNF223E7ERA6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF223E7ERA6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF223E7ERA6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RNF223E7ERA6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF223E7ERA6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF223E7ERA6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF223E7ERA6 KRT8P36-201ENST00000489121 1440 ntBASIC16.65■□□□□ 0.26
RNF223E7ERA6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF223E7ERA6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF223E7ERA6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RNF223E7ERA6 TERF1P1-201ENST00000311003 1181 ntBASIC16.65■□□□□ 0.26
RNF223E7ERA6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF223E7ERA6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF223E7ERA6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF223E7ERA6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF223E7ERA6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
RNF223E7ERA6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF223E7ERA6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF223E7ERA6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF223E7ERA6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF223E7ERA6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF223E7ERA6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF223E7ERA6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF223E7ERA6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF223E7ERA6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF223E7ERA6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RNF223E7ERA6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF223E7ERA6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF223E7ERA6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF223E7ERA6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF223E7ERA6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF223E7ERA6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF223E7ERA6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF223E7ERA6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF223E7ERA6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.64■□□□□ 0.25
RNF223E7ERA6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF223E7ERA6 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF223E7ERA6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF223E7ERA6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF223E7ERA6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RNF223E7ERA6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF223E7ERA6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF223E7ERA6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF223E7ERA6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF223E7ERA6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
RNF223E7ERA6 AC027702.1-201ENST00000563810 1770 ntBASIC16.64■□□□□ 0.25
RNF223E7ERA6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF223E7ERA6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF223E7ERA6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RNF223E7ERA6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF223E7ERA6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF223E7ERA6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF223E7ERA6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF223E7ERA6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF223E7ERA6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF223E7ERA6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF223E7ERA6 FITM1-202ENST00000559294 800 ntBASIC16.63■□□□□ 0.25
RNF223E7ERA6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RNF223E7ERA6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
RNF223E7ERA6 AC010947.1-201ENST00000623454 693 ntBASIC16.63■□□□□ 0.25
RNF223E7ERA6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.63■□□□□ 0.25
RNF223E7ERA6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF223E7ERA6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF223E7ERA6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF223E7ERA6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF223E7ERA6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF223E7ERA6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF223E7ERA6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 KRT16P1-201ENST00000399124 1418 ntBASIC16.62■□□□□ 0.25
RNF223E7ERA6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF223E7ERA6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 HLA-G-202ENST00000376815 851 ntBASIC16.62■□□□□ 0.25
RNF223E7ERA6 HLA-G-203ENST00000376818 1127 ntBASIC16.62■□□□□ 0.25
RNF223E7ERA6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF223E7ERA6 SLC25A3P1-201ENST00000443844 931 ntBASIC16.62■□□□□ 0.25
RNF223E7ERA6 KSR1P1-201ENST00000446298 240 ntBASIC16.62■□□□□ 0.25
RNF223E7ERA6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
RNF223E7ERA6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.62■□□□□ 0.25
RNF223E7ERA6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms