Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RCCD1A6NED2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RCCD1A6NED2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RCCD1A6NED2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RCCD1A6NED2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RCCD1A6NED2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.31■■□□□ 1
RCCD1A6NED2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RCCD1A6NED2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RCCD1A6NED2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.31■■□□□ 1
RCCD1A6NED2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RCCD1A6NED2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.31■■□□□ 1
RCCD1A6NED2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.31■■□□□ 1
RCCD1A6NED2 CDV3P1-201ENST00000471403 739 ntBASIC21.31■■□□□ 1
RCCD1A6NED2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.31■■□□□ 1
RCCD1A6NED2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.31■■□□□ 1
RCCD1A6NED2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.31■■□□□ 1
RCCD1A6NED2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.31■■□□□ 1
RCCD1A6NED2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.31■■□□□ 1
RCCD1A6NED2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RCCD1A6NED2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.31■■□□□ 1
RCCD1A6NED2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RCCD1A6NED2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.3■■□□□ 1
RCCD1A6NED2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.3■■□□□ 1
RCCD1A6NED2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RCCD1A6NED2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RCCD1A6NED2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.3■■□□□ 1
RCCD1A6NED2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.3■■□□□ 1
RCCD1A6NED2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
RCCD1A6NED2 Z82202.1-201ENST00000623446 1880 ntBASIC21.3■■□□□ 1
RCCD1A6NED2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RCCD1A6NED2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.29■■□□□ 1
RCCD1A6NED2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.29■■□□□ 1
RCCD1A6NED2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RCCD1A6NED2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RCCD1A6NED2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RCCD1A6NED2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.29■■□□□ 1
RCCD1A6NED2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RCCD1A6NED2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RCCD1A6NED2 CYP21A1P-202ENST00000354927 1481 ntBASIC21.29■■□□□ 1
RCCD1A6NED2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.29■■□□□ 1
RCCD1A6NED2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.29■■□□□ 1
RCCD1A6NED2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.29■■□□□ 1
RCCD1A6NED2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RCCD1A6NED2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.29■■□□□ 1
RCCD1A6NED2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RCCD1A6NED2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.29■■□□□ 1
RCCD1A6NED2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.29■■□□□ 1
RCCD1A6NED2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.29■■□□□ 1
RCCD1A6NED2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RCCD1A6NED2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RCCD1A6NED2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.28■■□□□ 1
RCCD1A6NED2 AC009237.14-201ENST00000609975 1594 ntBASIC21.28■■□□□ 1
RCCD1A6NED2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RCCD1A6NED2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.28■■□□□ 1
RCCD1A6NED2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RCCD1A6NED2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.28■■□□□ 1
RCCD1A6NED2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.28■■□□□ 1
RCCD1A6NED2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.28■■□□□ 1
RCCD1A6NED2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RCCD1A6NED2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.28■■□□□ 1
RCCD1A6NED2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RCCD1A6NED2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RCCD1A6NED2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RCCD1A6NED2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.28■■□□□ 1
RCCD1A6NED2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
RCCD1A6NED2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RCCD1A6NED2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.28■■□□□ 1
RCCD1A6NED2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RCCD1A6NED2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RCCD1A6NED2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.27■■□□□ 1
RCCD1A6NED2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RCCD1A6NED2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RCCD1A6NED2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RCCD1A6NED2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.27■■□□□ 1
RCCD1A6NED2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RCCD1A6NED2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.27■■□□□ 1
RCCD1A6NED2 MIR638-201ENST00000385237 100 ntBASIC21.27■■□□□ 1
RCCD1A6NED2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.27■■□□□ 1
RCCD1A6NED2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RCCD1A6NED2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.27■■□□□ 1
RCCD1A6NED2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RCCD1A6NED2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.27■■□□□ 1
RCCD1A6NED2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RCCD1A6NED2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.27■■□□□ 1
RCCD1A6NED2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
RCCD1A6NED2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.27■□□□□ 0.99
RCCD1A6NED2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RCCD1A6NED2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.27■□□□□ 0.99
RCCD1A6NED2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RCCD1A6NED2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
RCCD1A6NED2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RCCD1A6NED2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
RCCD1A6NED2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RCCD1A6NED2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RCCD1A6NED2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.26■□□□□ 0.99
RCCD1A6NED2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
RCCD1A6NED2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RCCD1A6NED2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RCCD1A6NED2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
RCCD1A6NED2 AC097381.1-201ENST00000429019 1296 ntBASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms