Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 CYP2T3P-201ENST00000601990 817 ntBASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AL589743.5-201ENST00000616611 1050 ntBASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 MYC-209ENST00000641252 345 ntBASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 MCRIP2P1-201ENST00000394346 511 ntBASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TCRBV4S1A1TA0A5B7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AFG3L1P-217ENST00000557444 2447 ntBASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 KRT17P1-201ENST00000399211 1546 ntBASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AC099778.1-201ENST00000568593 1911 ntBASIC16.06■□□□□ 0.16
TCRBV4S1A1TA0A5B7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AC092720.2-201ENST00000602388 1665 ntBASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 KRT18P68-201ENST00000392293 1000 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms