Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 AL032819.2-201ENST00000624543 2162 ntBASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 AL136116.3-201ENST00000402907 1138 ntBASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 AC010141.2-201ENST00000452426 721 ntBASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 AC079140.4-201ENST00000507448 529 ntBASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV1-2A0A0B4J238 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 AC007322.3-201ENST00000426526 701 ntBASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 AL355001.2-201ENST00000620617 1191 ntBASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRAV1-2A0A0B4J238 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV1-2A0A0B4J238 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
TRAV1-2A0A0B4J238 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV1-2A0A0B4J238 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 AC091799.1-201ENST00000422823 811 ntBASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 AC243732.1-201ENST00000612648 864 ntBASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV1-2A0A0B4J238 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms