Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 AC007322.4-201ENST00000509611 723 ntBASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV8-2A0A0B4J237 BX119927.1-201ENST00000636596 1552 ntBASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 PGM5P4-201ENST00000421970 445 ntBASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 KRT18P11-201ENST00000435214 1283 ntBASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 KRT18P5-201ENST00000436075 1291 ntBASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 AC137761.2-201ENST00000561729 223 ntBASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 AL162412.1-201ENST00000567129 965 ntBASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 AC145350.3-201ENST00000569033 163 ntBASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 MFSD11-216ENST00000590393 1141 ntBASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 AC013268.1-206ENST00000638368 961 ntBASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 AC112229.1-201ENST00000639295 961 ntBASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 AC125437.2-201ENST00000625180 2167 ntBASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 AL691432.2-201ENST00000607222 2038 ntBASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-2A0A0B4J237 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV8-2A0A0B4J237 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms