Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
SNX18Q96RF0 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SNX18Q96RF0 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SNX18Q96RF0 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AL080312.1-201ENST00000256654 824 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 CST13P-201ENST00000376992 428 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 MIR640-201ENST00000385086 96 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 MAML3-201ENST00000398940 831 ntTSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AL139806.1-201ENST00000403057 1002 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 RPSAP72-201ENST00000407020 358 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 SNORA81-201ENST00000408493 178 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 RPS21P8-201ENST00000413365 247 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 YBX1P8-201ENST00000421881 943 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC008753.1-201ENST00000423096 284 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 MORF4L1P5-201ENST00000433352 961 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 FDPSP8-201ENST00000438304 1089 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC092447.7-202ENST00000443198 580 ntTSL 2 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 MTND2P3-201ENST00000452458 470 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC096922.1-201ENST00000461635 651 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AL355076.1-201ENST00000484315 270 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 AL133372.1-201ENST00000493565 745 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 NTAN1P2-201ENST00000515730 940 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 RNA5SP116-201ENST00000516132 98 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC092451.2-201ENST00000538746 658 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 MIR4258-201ENST00000580920 91 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC092474.3-201ENST00000603022 568 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC005229.3-201ENST00000603438 323 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC091167.5-201ENST00000605689 894 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 BX322635.1-201ENST00000605804 496 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 MIR6736-201ENST00000616799 59 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 AL391597.1-201ENST00000618707 694 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 AP002371.2-201ENST00000624450 503 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 AL356094.1-201ENST00000624663 1212 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 ZBTB20-AS5-203ENST00000628886 819 ntTSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC024475.4-201ENST00000635144 1206 ntTSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SNX18Q96RF0 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SNX18Q96RF0 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 CASC20-201ENST00000415932 1484 ntTSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC084782.1-201ENST00000564401 2465 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AL136981.1-203ENST00000451452 3844 ntBASIC6.89□□□□□ -1.31
SNX18Q96RF0 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SNX18Q96RF0 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC6.88□□□□□ -1.31
SNX18Q96RF0 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC022417.1-201ENST00000624768 1303 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 AC090983.1-201ENST00000623426 3897 ntBASIC6.88□□□□□ -1.31
SNX18Q96RF0 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms