Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC006070.1-201ENST00000508151 193 ntBASIC7.76□□□□□ -1.17
NEK3P51956 AC097460.2-201ENST00000511857 741 ntBASIC7.76□□□□□ -1.17
NEK3P51956 AC022296.2-201ENST00000512424 202 ntBASIC7.76□□□□□ -1.17
NEK3P51956 RNU6-362P-201ENST00000516736 90 ntBASIC7.76□□□□□ -1.17
NEK3P51956 PTTG3P-201ENST00000521862 606 ntBASIC7.76□□□□□ -1.17
NEK3P51956 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC7.76□□□□□ -1.17
NEK3P51956 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.76□□□□□ -1.17
NEK3P51956 COX4I1P1-201ENST00000554239 509 ntBASIC7.76□□□□□ -1.17
NEK3P51956 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 AC138473.1-201ENST00000605717 526 ntBASIC7.76□□□□□ -1.17
NEK3P51956 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC7.76□□□□□ -1.17
NEK3P51956 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC7.76□□□□□ -1.17
NEK3P51956 AC097641.3-201ENST00000613523 464 ntBASIC7.76□□□□□ -1.17
NEK3P51956 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC7.76□□□□□ -1.17
NEK3P51956 AC005383.1-201ENST00000622689 534 ntBASIC7.76□□□□□ -1.17
NEK3P51956 AC110769.3-201ENST00000624567 1173 ntBASIC7.76□□□□□ -1.17
NEK3P51956 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC7.76□□□□□ -1.17
NEK3P51956 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.76□□□□□ -1.17
NEK3P51956 CASC19-208ENST00000641056 1292 ntBASIC7.76□□□□□ -1.17
NEK3P51956 CASC19-227ENST00000641411 1285 ntBASIC7.76□□□□□ -1.17
NEK3P51956 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 RBMY1A3P-201ENST00000382670 1404 ntBASIC7.76□□□□□ -1.17
NEK3P51956 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.76□□□□□ -1.17
NEK3P51956 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
NEK3P51956 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.76□□□□□ -1.17
NEK3P51956 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
NEK3P51956 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
NEK3P51956 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.75□□□□□ -1.17
NEK3P51956 NF1P8-201ENST00000415351 1461 ntBASIC7.75□□□□□ -1.17
NEK3P51956 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
NEK3P51956 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 BRD7P6-201ENST00000431406 1860 ntBASIC7.75□□□□□ -1.17
NEK3P51956 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.75□□□□□ -1.17
NEK3P51956 SNORA30B-201ENST00000365319 129 ntBASIC7.75□□□□□ -1.17
NEK3P51956 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 SSX9-201ENST00000376909 591 ntBASIC7.75□□□□□ -1.17
NEK3P51956 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 GSTA10P-201ENST00000412182 576 ntBASIC7.75□□□□□ -1.17
NEK3P51956 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 AC023141.1-201ENST00000419418 379 ntBASIC7.75□□□□□ -1.17
NEK3P51956 TCEAL4P1-201ENST00000453620 588 ntBASIC7.75□□□□□ -1.17
NEK3P51956 AC007386.1-201ENST00000455212 582 ntBASIC7.75□□□□□ -1.17
NEK3P51956 AC013787.1-201ENST00000460165 307 ntBASIC7.75□□□□□ -1.17
NEK3P51956 AGGF1P3-201ENST00000493675 1213 ntBASIC7.75□□□□□ -1.17
NEK3P51956 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.75□□□□□ -1.17
NEK3P51956 AC100823.2-201ENST00000518337 699 ntBASIC7.75□□□□□ -1.17
NEK3P51956 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC7.75□□□□□ -1.17
NEK3P51956 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC7.75□□□□□ -1.17
NEK3P51956 AC130364.2-201ENST00000528639 604 ntBASIC7.75□□□□□ -1.17
NEK3P51956 OR4A13P-201ENST00000529316 942 ntBASIC7.75□□□□□ -1.17
NEK3P51956 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 OR7E2P-201ENST00000533071 889 ntBASIC7.75□□□□□ -1.17
NEK3P51956 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC7.75□□□□□ -1.17
NEK3P51956 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC7.75□□□□□ -1.17
NEK3P51956 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.75□□□□□ -1.17
NEK3P51956 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC7.75□□□□□ -1.17
NEK3P51956 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC7.75□□□□□ -1.17
NEK3P51956 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.75□□□□□ -1.17
NEK3P51956 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.75□□□□□ -1.17
NEK3P51956 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 THAP12P8-201ENST00000447914 2115 ntBASIC7.75□□□□□ -1.17
NEK3P51956 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.75□□□□□ -1.17
NEK3P51956 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.75□□□□□ -1.17
NEK3P51956 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
NEK3P51956 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NEK3P51956 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 SALL4P7-201ENST00000555779 3120 ntBASIC7.74□□□□□ -1.17
NEK3P51956 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 SAMMSON-222ENST00000641901 2727 ntBASIC7.74□□□□□ -1.17
NEK3P51956 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.74□□□□□ -1.17
NEK3P51956 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.74□□□□□ -1.17
NEK3P51956 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.74□□□□□ -1.17
NEK3P51956 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.74□□□□□ -1.17
NEK3P51956 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
NEK3P51956 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
NEK3P51956 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.74□□□□□ -1.17
NEK3P51956 AL050305.1-201ENST00000399993 1230 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms