Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC10.12□□□□□ -0.79
CPS1P31327 RN7SL37P-201ENST00000490461 307 ntBASIC10.12□□□□□ -0.79
CPS1P31327 RPL7P51-201ENST00000490532 749 ntBASIC10.12□□□□□ -0.79
CPS1P31327 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC10.12□□□□□ -0.79
CPS1P31327 RN7SL101P-201ENST00000496350 279 ntBASIC10.12□□□□□ -0.79
CPS1P31327 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC10.12□□□□□ -0.79
CPS1P31327 IGKV2D-38-201ENST00000518423 240 ntBASIC10.12□□□□□ -0.79
CPS1P31327 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC10.12□□□□□ -0.79
CPS1P31327 AC239803.2-201ENST00000610161 430 ntBASIC10.12□□□□□ -0.79
CPS1P31327 AC109309.2-201ENST00000612597 332 ntBASIC10.12□□□□□ -0.79
CPS1P31327 CASC19-208ENST00000641056 1292 ntBASIC10.12□□□□□ -0.79
CPS1P31327 CASC19-227ENST00000641411 1285 ntBASIC10.12□□□□□ -0.79
CPS1P31327 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC10.12□□□□□ -0.79
CPS1P31327 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC10.12□□□□□ -0.79
CPS1P31327 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CPS1P31327 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
CPS1P31327 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CPS1P31327 TMCC1P1-201ENST00000518897 1980 ntBASIC10.11□□□□□ -0.79
CPS1P31327 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC10.11□□□□□ -0.79
CPS1P31327 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CPS1P31327 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CPS1P31327 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CPS1P31327 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
CPS1P31327 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CPS1P31327 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC10.11□□□□□ -0.79
CPS1P31327 AC092701.1-201ENST00000623627 1551 ntBASIC10.11□□□□□ -0.79
CPS1P31327 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CPS1P31327 TMEM33-203ENST00000504986 7482 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CPS1P31327 TRIM60P19-201ENST00000452879 1462 ntBASIC10.11□□□□□ -0.79
CPS1P31327 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC10.11□□□□□ -0.79
CPS1P31327 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
CPS1P31327 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CPS1P31327 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CPS1P31327 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC10.11□□□□□ -0.79
CPS1P31327 CCDC113-202ENST00000443128 5110 ntTSL 2 BASIC10.11□□□□□ -0.79
CPS1P31327 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
CPS1P31327 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
CPS1P31327 RBBP4P5-201ENST00000398583 1266 ntBASIC10.11□□□□□ -0.79
CPS1P31327 AL603650.1-201ENST00000412680 240 ntBASIC10.11□□□□□ -0.79
CPS1P31327 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC10.11□□□□□ -0.79
CPS1P31327 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC10.11□□□□□ -0.79
CPS1P31327 RPS14P7-201ENST00000473701 448 ntBASIC10.11□□□□□ -0.79
CPS1P31327 AC099340.1-201ENST00000475247 599 ntBASIC10.11□□□□□ -0.79
CPS1P31327 AC112484.3-201ENST00000505910 329 ntBASIC10.11□□□□□ -0.79
CPS1P31327 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC10.11□□□□□ -0.79
CPS1P31327 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC10.11□□□□□ -0.79
CPS1P31327 HMGN1P16-201ENST00000508308 283 ntBASIC10.11□□□□□ -0.79
CPS1P31327 AC027308.1-201ENST00000517993 110 ntBASIC10.11□□□□□ -0.79
CPS1P31327 IGKV3D-31-201ENST00000519131 281 ntBASIC10.11□□□□□ -0.79
CPS1P31327 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC10.11□□□□□ -0.79
CPS1P31327 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC10.11□□□□□ -0.79
CPS1P31327 AL845552.1-201ENST00000556820 323 ntBASIC10.11□□□□□ -0.79
CPS1P31327 DIMT1P1-201ENST00000603970 763 ntBASIC10.11□□□□□ -0.79
CPS1P31327 AC005858.3-201ENST00000624756 589 ntBASIC10.11□□□□□ -0.79
CPS1P31327 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CPS1P31327 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CPS1P31327 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CPS1P31327 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CPS1P31327 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CPS1P31327 AL162171.3-201ENST00000617439 3178 ntBASIC10.11□□□□□ -0.79
CPS1P31327 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC10.11□□□□□ -0.79
CPS1P31327 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CPS1P31327 ANKRD20A11P-206ENST00000451663 3717 ntBASIC10.1□□□□□ -0.79
CPS1P31327 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CPS1P31327 AL035563.1-201ENST00000609087 1539 ntBASIC10.1□□□□□ -0.79
CPS1P31327 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
CPS1P31327 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC10.1□□□□□ -0.79
CPS1P31327 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
CPS1P31327 RN7SKP107-201ENST00000364157 290 ntBASIC10.1□□□□□ -0.79
CPS1P31327 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
CPS1P31327 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC10.1□□□□□ -0.79
CPS1P31327 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC10.1□□□□□ -0.79
CPS1P31327 RPL12P16-201ENST00000431098 498 ntBASIC10.1□□□□□ -0.79
CPS1P31327 GAPDHP59-201ENST00000435908 267 ntBASIC10.1□□□□□ -0.79
CPS1P31327 RPL34P34-201ENST00000465389 354 ntBASIC10.1□□□□□ -0.79
CPS1P31327 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC10.1□□□□□ -0.79
CPS1P31327 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC10.1□□□□□ -0.79
CPS1P31327 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CPS1P31327 AL078601.3-201ENST00000573303 535 ntBASIC10.1□□□□□ -0.79
CPS1P31327 AL365223.1-201ENST00000574864 1297 ntBASIC10.1□□□□□ -0.79
CPS1P31327 NPM1P45-201ENST00000583151 559 ntBASIC10.1□□□□□ -0.79
CPS1P31327 RPL29P33-201ENST00000587474 316 ntBASIC10.1□□□□□ -0.79
CPS1P31327 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CPS1P31327 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC10.1□□□□□ -0.79
CPS1P31327 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC10.1□□□□□ -0.79
CPS1P31327 AC007126.1-201ENST00000508202 4781 ntBASIC10.1□□□□□ -0.79
CPS1P31327 OPCML-201ENST00000331898 6833 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CPS1P31327 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CPS1P31327 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CPS1P31327 CNTNAP4-202ENST00000377504 4723 ntTSL 5 BASIC10.1□□□□□ -0.79
CPS1P31327 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CPS1P31327 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CPS1P31327 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
CPS1P31327 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CPS1P31327 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CPS1P31327 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CPS1P31327 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CPS1P31327 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
CPS1P31327 AC138207.6-201ENST00000579164 1967 ntBASIC10.09□□□□□ -0.79
CPS1P31327 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms