Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MAPK10-281ENST00000641170 3070 ntBASIC8.61□□□□□ -1.03
HLA-DOAP06340 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-DOAP06340 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-DOAP06340 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-DOAP06340 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC8.61□□□□□ -1.03
HLA-DOAP06340 AC245505.2-201ENST00000553572 3055 ntBASIC8.6□□□□□ -1.03
HLA-DOAP06340 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-DOAP06340 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-DOAP06340 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-DOAP06340 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 OR51A10P-201ENST00000307165 937 ntBASIC8.6□□□□□ -1.03
HLA-DOAP06340 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-DOAP06340 SNORA70.5-201ENST00000365519 135 ntBASIC8.6□□□□□ -1.03
HLA-DOAP06340 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 ST13P21-201ENST00000453250 1098 ntBASIC8.6□□□□□ -1.03
HLA-DOAP06340 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 WBP1LP1-201ENST00000460451 896 ntBASIC8.6□□□□□ -1.03
HLA-DOAP06340 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-DOAP06340 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 RN7SL667P-201ENST00000582817 298 ntBASIC8.6□□□□□ -1.03
HLA-DOAP06340 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC8.6□□□□□ -1.03
HLA-DOAP06340 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 AC026108.1-201ENST00000635444 547 ntBASIC8.6□□□□□ -1.03
HLA-DOAP06340 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-DOAP06340 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-DOAP06340 NLRP9P1-201ENST00000540920 2655 ntBASIC8.6□□□□□ -1.03
HLA-DOAP06340 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 AC009948.5-201ENST00000624360 4406 ntBASIC8.6□□□□□ -1.03
HLA-DOAP06340 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
HLA-DOAP06340 HSPA8P11-201ENST00000508840 1898 ntBASIC8.6□□□□□ -1.03
HLA-DOAP06340 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 AP003175.1-201ENST00000641383 6658 ntBASIC8.59□□□□□ -1.03
HLA-DOAP06340 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 RNU1-56P-201ENST00000391303 164 ntBASIC8.59□□□□□ -1.03
HLA-DOAP06340 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 FBP2P1-202ENST00000424473 530 ntBASIC8.59□□□□□ -1.03
HLA-DOAP06340 GAPDHP69-201ENST00000425504 1008 ntBASIC8.59□□□□□ -1.03
HLA-DOAP06340 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 RPLP0P1-201ENST00000457002 361 ntBASIC8.59□□□□□ -1.03
HLA-DOAP06340 AC126615.1-201ENST00000470084 630 ntBASIC8.59□□□□□ -1.03
HLA-DOAP06340 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 AC012629.3-201ENST00000623397 328 ntBASIC8.59□□□□□ -1.03
HLA-DOAP06340 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 MIR665-201ENST00000635949 72 ntBASIC8.59□□□□□ -1.03
HLA-DOAP06340 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC8.59□□□□□ -1.03
HLA-DOAP06340 ARHGAP42P2-201ENST00000416089 2140 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms