Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 LINC01284-201ENST00000442994 730 ntTSL 5 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 AC245047.6-201ENST00000445444 617 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 OR7E102P-201ENST00000448855 1015 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 RN7SL12P-201ENST00000473849 290 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 RPL5P11-201ENST00000498068 893 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 GCSHP1-201ENST00000512554 484 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 RN7SL376P-201ENST00000578594 264 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 AC090699.1-201ENST00000586264 321 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 AC009955.2-201ENST00000597288 542 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 AL021807.1-201ENST00000607175 565 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 AC012557.3-201ENST00000626439 255 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 BRD7P6-201ENST00000431406 1860 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 RN7SKP174-201ENST00000363803 330 ntBASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 RN7SKP50-201ENST00000364694 315 ntBASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 EEF1A1P15-201ENST00000395772 1408 ntBASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 AL008626.1-201ENST00000412357 775 ntTSL 2 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 GSTA6P-201ENST00000424144 582 ntBASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 CYP4F32P-201ENST00000426492 504 ntBASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 KRT18P53-201ENST00000431919 117 ntBASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 AC025262.1-201ENST00000434563 589 ntTSL 5 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 BZW1P1-201ENST00000454901 1240 ntBASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 CREM-224ENST00000468236 582 ntTSL 3 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 RN7SL89P-201ENST00000480252 283 ntBASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 RN7SL332P-201ENST00000482163 254 ntBASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 CREM-234ENST00000484283 660 ntTSL 5 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 RPL12P7-201ENST00000493832 494 ntBASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 NMNAT1P4-201ENST00000505598 840 ntBASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 AC090371.1-201ENST00000580071 558 ntTSL 4 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 RPL35AP25-201ENST00000584631 330 ntBASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 AC010719.1-201ENST00000602992 747 ntBASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 AC016251.2-201ENST00000623393 3089 ntBASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC6.8□□□□□ -1.32
CCNB1IP1Q9NPC3 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.79□□□□□ -1.32
CCNB1IP1Q9NPC3 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCNB1IP1Q9NPC3 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNB1IP1Q9NPC3 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC6.79□□□□□ -1.32
CCNB1IP1Q9NPC3 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.79□□□□□ -1.32
CCNB1IP1Q9NPC3 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCNB1IP1Q9NPC3 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms