Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 ERG-205ENST00000398910 4954 ntTSL 5 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 ITPK1-AS1-201ENST00000553639 4701 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 RPL12P13-201ENST00000310055 497 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 RPL6P2-201ENST00000425480 783 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 AC000362.1-201ENST00000433725 425 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 AC079781.1-201ENST00000441505 394 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 AC013429.1-201ENST00000456604 422 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 RN7SL58P-201ENST00000473445 294 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 AC008040.4-201ENST00000494834 768 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 RN7SL516P-201ENST00000496127 297 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 RPL5P11-201ENST00000498068 893 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 ULK4P1-202ENST00000565174 503 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 AL355333.1-201ENST00000605632 279 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 AC023310.4-201ENST00000613130 650 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 AC034229.6-201ENST00000623704 224 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 CASC19-232ENST00000641480 1244 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 THAP12P3-201ENST00000456373 2266 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 OR8B9P-202ENST00000642028 5216 ntBASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RSPO3Q9BXY4 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 AP000766.1-201ENST00000561746 4140 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 MAPK10-323ENST00000641493 3207 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 RNU1-38P-201ENST00000362817 144 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 IFNA12P-201ENST00000413147 571 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 AL773545.3-201ENST00000414297 706 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 RPL5P27-201ENST00000437011 881 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 AC127024.1-201ENST00000490847 418 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 PABPC1P1-201ENST00000506347 591 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 ENPP7P3-201ENST00000509123 241 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 AC106800.2-201ENST00000514009 1103 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 GLYATL1P4-201ENST00000529326 906 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 MIR4262-201ENST00000578394 54 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 MIR4258-201ENST00000580920 91 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 AL023806.2-201ENST00000603042 263 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 AL139123.1-201ENST00000612008 430 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 AL353898.2-201ENST00000623000 255 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 AC005785.2-201ENST00000624655 631 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 AL139254.2-202ENST00000641937 1156 ntBASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RSPO3Q9BXY4 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms