Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 AL451085.1-201ENST00000604546 690 ntBASIC8.14□□□□□ -1.11
PGBD4Q96DM1 AC012640.3-201ENST00000607847 430 ntBASIC8.14□□□□□ -1.11
PGBD4Q96DM1 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 AL353898.3-201ENST00000624679 1755 ntBASIC8.14□□□□□ -1.11
PGBD4Q96DM1 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 RN7SKP225-201ENST00000410405 352 ntBASIC8.13□□□□□ -1.11
PGBD4Q96DM1 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 AL390840.1-201ENST00000420303 988 ntBASIC8.13□□□□□ -1.11
PGBD4Q96DM1 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 AC005550.2-201ENST00000476382 318 ntBASIC8.13□□□□□ -1.11
PGBD4Q96DM1 RPS10P28-201ENST00000480396 498 ntBASIC8.13□□□□□ -1.11
PGBD4Q96DM1 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 ANK3-213ENST00000486349 493 ntTSL 2 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 IGKV3D-31-201ENST00000519131 281 ntBASIC8.13□□□□□ -1.11
PGBD4Q96DM1 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 EGLN3P1-201ENST00000541727 720 ntBASIC8.13□□□□□ -1.11
PGBD4Q96DM1 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 AL136139.1-201ENST00000605568 222 ntBASIC8.13□□□□□ -1.11
PGBD4Q96DM1 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC8.13□□□□□ -1.11
PGBD4Q96DM1 SNORA43.5-201ENST00000631270 138 ntBASIC8.13□□□□□ -1.11
PGBD4Q96DM1 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 OR5M2P-202ENST00000641241 4242 ntBASIC8.13□□□□□ -1.11
PGBD4Q96DM1 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 AC016930.1-201ENST00000468766 2205 ntBASIC8.13□□□□□ -1.11
PGBD4Q96DM1 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PGBD4Q96DM1 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 MAPK10-354ENST00000641823 2732 ntBASIC8.12□□□□□ -1.11
PGBD4Q96DM1 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 RNA5SP442-201ENST00000365050 107 ntBASIC8.12□□□□□ -1.11
PGBD4Q96DM1 MIR498-201ENST00000385134 124 ntBASIC8.12□□□□□ -1.11
PGBD4Q96DM1 AL355862.1-201ENST00000412705 353 ntBASIC8.12□□□□□ -1.11
PGBD4Q96DM1 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 RPL12P40-201ENST00000467028 488 ntBASIC8.12□□□□□ -1.11
PGBD4Q96DM1 RPL7AP30-201ENST00000482859 796 ntBASIC8.12□□□□□ -1.11
PGBD4Q96DM1 CARD8-214ENST00000520007 614 ntTSL 2 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC8.12□□□□□ -1.11
PGBD4Q96DM1 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms