Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
SUMO3P55854 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SUMO3P55854 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
SUMO3P55854 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SUMO3P55854 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SUMO3P55854 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SUMO3P55854 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.89□□□□□ -1.31
SUMO3P55854 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 GTF2IP1-202ENST00000614592 2047 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC6.89□□□□□ -1.31
SUMO3P55854 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 RERE-203ENST00000400907 2973 ntTSL 5 BASIC6.89□□□□□ -1.31
SUMO3P55854 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
SUMO3P55854 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC6.89□□□□□ -1.31
SUMO3P55854 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 RNU1-122P-201ENST00000365538 156 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC6.89□□□□□ -1.31
SUMO3P55854 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 ISY1-202ENST00000393292 988 ntTSL 5 BASIC6.89□□□□□ -1.31
SUMO3P55854 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 NUS1P4-201ENST00000401550 585 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 AC004986.1-201ENST00000414855 607 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 RPL5P28-201ENST00000418634 693 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC6.89□□□□□ -1.31
SUMO3P55854 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC6.89□□□□□ -1.31
SUMO3P55854 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC6.89□□□□□ -1.31
SUMO3P55854 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.89□□□□□ -1.31
SUMO3P55854 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC6.89□□□□□ -1.31
SUMO3P55854 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 CYP2C56P-201ENST00000440076 291 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
SUMO3P55854 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.89□□□□□ -1.31
SUMO3P55854 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC6.89□□□□□ -1.31
SUMO3P55854 PYM1-204ENST00000454792 884 ntTSL 2 BASIC6.89□□□□□ -1.31
SUMO3P55854 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.89□□□□□ -1.31
SUMO3P55854 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 AC005550.2-201ENST00000476382 318 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 RN7SL549P-201ENST00000478997 282 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC6.89□□□□□ -1.31
SUMO3P55854 RN7SL153P-201ENST00000486501 292 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 NPY6R-201ENST00000503807 1112 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 OR7E83P-201ENST00000511021 970 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 SNX18P27-201ENST00000523611 779 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC6.89□□□□□ -1.31
SUMO3P55854 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC6.89□□□□□ -1.31
SUMO3P55854 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.89□□□□□ -1.31
SUMO3P55854 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC6.89□□□□□ -1.31
SUMO3P55854 APEX1-214ENST00000557054 888 ntTSL 5 BASIC6.89□□□□□ -1.31
SUMO3P55854 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC6.89□□□□□ -1.31
SUMO3P55854 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC6.89□□□□□ -1.31
SUMO3P55854 AL391001.1-201ENST00000602747 715 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 AC105148.1-201ENST00000604961 409 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 AC073111.2-201ENST00000605657 1075 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 AL022238.3-201ENST00000609279 443 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 RN7SL680P-201ENST00000620379 299 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 AC006249.1-201ENST00000621223 471 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 FO681491.1-202ENST00000623392 737 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 AC099667.1-201ENST00000624222 469 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 AC129908.1-201ENST00000624553 648 ntBASIC6.89□□□□□ -1.31
SUMO3P55854 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SUMO3P55854 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
SUMO3P55854 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
SUMO3P55854 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SUMO3P55854 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC6.89□□□□□ -1.31
SUMO3P55854 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.89□□□□□ -1.31
SUMO3P55854 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SUMO3P55854 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.88□□□□□ -1.31
SUMO3P55854 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC6.88□□□□□ -1.31
SUMO3P55854 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
SUMO3P55854 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.88□□□□□ -1.31
SUMO3P55854 MAPK10-281ENST00000641170 3070 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC6.88□□□□□ -1.31
SUMO3P55854 AC087045.3-201ENST00000623046 2468 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 LRRC2-AS1-201ENST00000599511 2291 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AL512662.1-201ENST00000624850 2251 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms