Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 AL592504.1-201ENST00000605319 439 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOBP13765 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOBP13765 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOBP13765 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOBP13765 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOBP13765 SPATA31C2-201ENST00000324915 3777 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOBP13765 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOBP13765 EEF1A1P22-201ENST00000559385 1380 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 AL096816.1-201ENST00000623300 2920 ntBASIC6.56□□□□□ -1.36
HLA-DOBP13765 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOBP13765 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOBP13765 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 AL606490.2-201ENST00000457562 1330 ntBASIC6.56□□□□□ -1.36
HLA-DOBP13765 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOBP13765 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOBP13765 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOBP13765 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOBP13765 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOBP13765 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 AC012213.2-201ENST00000562917 4597 ntBASIC6.56□□□□□ -1.36
HLA-DOBP13765 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOBP13765 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOBP13765 RNA5SP238-201ENST00000365464 120 ntBASIC6.56□□□□□ -1.36
HLA-DOBP13765 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOBP13765 OR7E91P-201ENST00000400027 866 ntBASIC6.56□□□□□ -1.36
HLA-DOBP13765 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 EEF1GP7-201ENST00000422983 703 ntBASIC6.56□□□□□ -1.36
HLA-DOBP13765 AL354794.2-201ENST00000424795 1248 ntBASIC6.56□□□□□ -1.36
HLA-DOBP13765 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOBP13765 RPL7P14-201ENST00000449851 741 ntBASIC6.56□□□□□ -1.36
HLA-DOBP13765 VN1R6P-201ENST00000458417 907 ntBASIC6.56□□□□□ -1.36
HLA-DOBP13765 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 SSX8-201ENST00000506270 579 ntBASIC6.56□□□□□ -1.36
HLA-DOBP13765 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 ST13P6-201ENST00000522430 1102 ntBASIC6.56□□□□□ -1.36
HLA-DOBP13765 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 AL109936.2-201ENST00000605350 650 ntBASIC6.56□□□□□ -1.36
HLA-DOBP13765 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOBP13765 uc_338.21-201ENST00000622458 147 ntBASIC6.56□□□□□ -1.36
HLA-DOBP13765 AC002094.5-201ENST00000623773 629 ntBASIC6.56□□□□□ -1.36
HLA-DOBP13765 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOBP13765 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOBP13765 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOBP13765 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
HLA-DOBP13765 FO393409.1-201ENST00000399325 1372 ntBASIC6.56□□□□□ -1.36
HLA-DOBP13765 AL023806.3-201ENST00000638502 2704 ntBASIC6.56□□□□□ -1.36
HLA-DOBP13765 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 AC079777.1-201ENST00000623836 1953 ntBASIC6.55□□□□□ -1.36
HLA-DOBP13765 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOBP13765 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.55□□□□□ -1.36
HLA-DOBP13765 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms