Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC7.8□□□□□ -1.16
APOEP02649 AC097460.2-201ENST00000511857 741 ntBASIC7.8□□□□□ -1.16
APOEP02649 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC7.8□□□□□ -1.16
APOEP02649 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.8□□□□□ -1.16
APOEP02649 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC7.8□□□□□ -1.16
APOEP02649 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC7.8□□□□□ -1.16
APOEP02649 COX6CP11-201ENST00000555293 229 ntBASIC7.8□□□□□ -1.16
APOEP02649 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC7.8□□□□□ -1.16
APOEP02649 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC7.8□□□□□ -1.16
APOEP02649 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC7.8□□□□□ -1.16
APOEP02649 AC087893.2-201ENST00000623272 255 ntBASIC7.8□□□□□ -1.16
APOEP02649 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.8□□□□□ -1.16
APOEP02649 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.8□□□□□ -1.16
APOEP02649 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.8□□□□□ -1.16
APOEP02649 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
APOEP02649 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 AP003175.1-201ENST00000641383 6658 ntBASIC7.8□□□□□ -1.16
APOEP02649 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.8□□□□□ -1.16
APOEP02649 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.8□□□□□ -1.16
APOEP02649 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.8□□□□□ -1.16
APOEP02649 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 WASF5P-205ENST00000428639 1455 ntBASIC7.8□□□□□ -1.16
APOEP02649 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 TRIM51HP-202ENST00000530412 1823 ntBASIC7.8□□□□□ -1.16
APOEP02649 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
APOEP02649 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
APOEP02649 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.8□□□□□ -1.16
APOEP02649 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 FLJ42393-201ENST00000623801 2270 ntBASIC7.8□□□□□ -1.16
APOEP02649 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.8□□□□□ -1.16
APOEP02649 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
APOEP02649 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.79□□□□□ -1.16
APOEP02649 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
APOEP02649 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
APOEP02649 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.79□□□□□ -1.16
APOEP02649 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
APOEP02649 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
APOEP02649 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
APOEP02649 AL391380.1-201ENST00000439300 1432 ntBASIC7.79□□□□□ -1.16
APOEP02649 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
APOEP02649 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
APOEP02649 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
APOEP02649 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
APOEP02649 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
APOEP02649 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
APOEP02649 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.79□□□□□ -1.16
APOEP02649 SNORD46-201ENST00000364043 104 ntBASIC7.79□□□□□ -1.16
APOEP02649 AC226101.1-201ENST00000401483 387 ntBASIC7.79□□□□□ -1.16
APOEP02649 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC7.79□□□□□ -1.16
APOEP02649 AL451074.4-201ENST00000447545 470 ntBASIC7.79□□□□□ -1.16
APOEP02649 PCMTD1P3-201ENST00000451824 472 ntBASIC7.79□□□□□ -1.16
APOEP02649 OR7E62P-201ENST00000456741 477 ntBASIC7.79□□□□□ -1.16
APOEP02649 RN7SL516P-201ENST00000496127 297 ntBASIC7.79□□□□□ -1.16
APOEP02649 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC7.79□□□□□ -1.16
APOEP02649 ENPP7P3-201ENST00000509123 241 ntBASIC7.79□□□□□ -1.16
APOEP02649 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC7.79□□□□□ -1.16
APOEP02649 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC7.79□□□□□ -1.16
APOEP02649 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC7.79□□□□□ -1.16
APOEP02649 AC012181.2-201ENST00000570210 699 ntBASIC7.79□□□□□ -1.16
APOEP02649 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.79□□□□□ -1.16
APOEP02649 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC7.79□□□□□ -1.16
APOEP02649 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
APOEP02649 AC073488.2-201ENST00000631903 751 ntBASIC7.79□□□□□ -1.16
APOEP02649 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.79□□□□□ -1.16
APOEP02649 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.79□□□□□ -1.16
APOEP02649 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
APOEP02649 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
APOEP02649 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
APOEP02649 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.79□□□□□ -1.16
APOEP02649 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
APOEP02649 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
APOEP02649 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
APOEP02649 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.79□□□□□ -1.16
APOEP02649 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
APOEP02649 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
APOEP02649 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
APOEP02649 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
APOEP02649 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
APOEP02649 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
APOEP02649 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC7.78□□□□□ -1.16
APOEP02649 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.78□□□□□ -1.16
APOEP02649 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC7.78□□□□□ -1.16
APOEP02649 OR52K3P-202ENST00000641797 1729 ntBASIC7.78□□□□□ -1.16
APOEP02649 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
APOEP02649 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.78□□□□□ -1.16
APOEP02649 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
APOEP02649 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
APOEP02649 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
APOEP02649 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.78□□□□□ -1.16
APOEP02649 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
APOEP02649 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
APOEP02649 MIR575-201ENST00000385013 94 ntBASIC7.78□□□□□ -1.16
APOEP02649 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
APOEP02649 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
APOEP02649 AL139806.1-201ENST00000403057 1002 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms