Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC116353.2-201ENST00000505332 712 ntBASIC9.51□□□□□ -0.89
ALDH1A1P00352 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 PGBD4P4-201ENST00000509673 613 ntBASIC9.51□□□□□ -0.89
ALDH1A1P00352 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 AC091839.1-201ENST00000513087 269 ntBASIC9.51□□□□□ -0.89
ALDH1A1P00352 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 IGHV3-75-201ENST00000523951 358 ntBASIC9.51□□□□□ -0.89
ALDH1A1P00352 AP000619.2-201ENST00000546014 969 ntBASIC9.51□□□□□ -0.89
ALDH1A1P00352 AL162311.2-201ENST00000550416 709 ntBASIC9.51□□□□□ -0.89
ALDH1A1P00352 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
ALDH1A1P00352 AC008015.1-201ENST00000555505 465 ntBASIC9.51□□□□□ -0.89
ALDH1A1P00352 AC087481.2-201ENST00000565492 330 ntBASIC9.51□□□□□ -0.89
ALDH1A1P00352 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 AP005229.2-201ENST00000609980 697 ntBASIC9.51□□□□□ -0.89
ALDH1A1P00352 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALDH1A1P00352 AC104985.2-201ENST00000620598 500 ntBASIC9.51□□□□□ -0.89
ALDH1A1P00352 AC092656.1-203ENST00000624134 423 ntBASIC9.51□□□□□ -0.89
ALDH1A1P00352 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALDH1A1P00352 LINC00265-201ENST00000340510 3049 ntTSL 5 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 AP003716.1-202ENST00000511677 3387 ntTSL 2 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 CSNK2A1-202ENST00000349736 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALDH1A1P00352 SIX1-201ENST00000247182 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALDH1A1P00352 MSH2-202ENST00000406134 3628 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
ALDH1A1P00352 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 LINC01761-201ENST00000424943 2755 ntTSL 2 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALDH1A1P00352 CES5A-203ENST00000518005 2092 ntTSL 2 BASIC9.51□□□□□ -0.89
ALDH1A1P00352 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALDH1A1P00352 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALDH1A1P00352 OXNAD1-201ENST00000285083 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 AC107058.1-201ENST00000513297 1384 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 AL031595.3-201ENST00000624919 14262 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 XCR1-201ENST00000309285 5281 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 FTSJ3-201ENST00000427159 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 ZNF37CP-201ENST00000406795 241 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 AL136981.1-201ENST00000411450 549 ntTSL 4 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 SETP15-201ENST00000412724 337 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 AL365203.2-201ENST00000423444 196 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 MTCO1P52-201ENST00000433928 531 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 LINC00379-202ENST00000438789 464 ntTSL 3 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 ARMC8P1-201ENST00000443069 1289 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 CCRL1P1-201ENST00000449542 1053 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 RPL34P22-201ENST00000468193 318 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 AC026444.1-201ENST00000502592 496 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 AC107385.1-201ENST00000507985 778 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 AC026700.1-201ENST00000512074 544 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 IGHVIII-82-201ENST00000522058 250 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 AP003385.2-201ENST00000524910 973 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 AC079064.1-201ENST00000528365 362 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 RAB11AP2-201ENST00000545905 639 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 AC027796.1-201ENST00000575593 512 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 AC022001.1-201ENST00000605193 268 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 AL592221.1-201ENST00000605266 382 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 AC113554.1-201ENST00000606284 490 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 RN7SKP299-201ENST00000606679 301 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 AL354976.1-201ENST00000613843 387 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 AC133552.3-201ENST00000572236 1869 ntBASIC9.5□□□□□ -0.89
ALDH1A1P00352 OGDH-206ENST00000447398 3474 ntTSL 5 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 MATN2-208ENST00000520016 3495 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 ZNF155-209ENST00000611002 2732 ntAPPRIS P3 TSL 4 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 GNL3L-202ENST00000360845 2135 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 PCDHGA5-202ENST00000611914 3552 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms