Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AC126773.4-201ENST00000612545 3043 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 GSTA10P-201ENST00000412182 576 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AC068138.1-201ENST00000412635 217 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AC004986.1-201ENST00000414855 607 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AC105052.2-201ENST00000434317 794 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 GTF2F2P2-201ENST00000445825 721 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AC006042.1-201ENST00000449931 524 ntTSL 4 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 RPL36AP55-201ENST00000454114 305 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 RPL12P40-201ENST00000467028 488 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AC008620.1-201ENST00000468453 592 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AL589765.5-201ENST00000596133 515 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AC016629.2-201ENST00000597341 199 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AL390058.1-201ENST00000603834 629 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AL034408.1-201ENST00000637712 664 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 SAMMSON-214ENST00000641395 1264 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 PHF2P2-202ENST00000444553 2865 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 AC025040.2-201ENST00000558657 1852 ntBASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPIPA3F8WFD2 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 RNA5SP396-201ENST00000364834 120 ntBASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 RNA5SP442-201ENST00000365050 107 ntBASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AL031736.1-201ENST00000449688 618 ntBASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 PTMAP1-205ENST00000455552 325 ntBASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AC018639.1-201ENST00000492994 442 ntBASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AC233724.10-201ENST00000510454 409 ntBASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AP004607.5-201ENST00000532034 217 ntBASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AC068631.3-201ENST00000538831 225 ntBASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 RPS11-203ENST00000596873 583 ntTSL 2 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AC139795.3-201ENST00000606358 541 ntBASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 MIAT_exon1.1-201ENST00000617016 135 ntBASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AC243830.2-201ENST00000618067 630 ntBASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AL121985.3-201ENST00000620690 523 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms