Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 ANKRD20A19P-203ENST00000602724 295 ntBASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 AL669830.1-201ENST00000621457 656 ntBASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 AC074198.1-201ENST00000506546 1397 ntBASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DRB4X5D2U9 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AL353795.1-201ENST00000439134 1775 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AC126773.4-201ENST00000612545 3043 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 KRT18P52-201ENST00000404956 846 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 RN7SKP89-201ENST00000410774 242 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 BX119917.1-201ENST00000432517 502 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 PRELID1P3-201ENST00000450055 643 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AC092570.2-201ENST00000452117 1143 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AC021074.2-201ENST00000468434 172 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 RN7SL233P-201ENST00000469988 277 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 GLRXP3-201ENST00000470810 321 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AP000619.1-201ENST00000540293 1000 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 MIR3689C-201ENST00000581239 72 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AC090415.1-201ENST00000581877 847 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AC005495.1-201ENST00000586611 1211 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AP000436.1-201ENST00000605239 800 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AC099667.1-201ENST00000624222 469 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 CASC19-208ENST00000641056 1292 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 CASC19-227ENST00000641411 1285 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 AC022507.1-201ENST00000548349 1505 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 MAPK10-323ENST00000641493 3207 ntBASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DRB4X5D2U9 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 AC090983.1-201ENST00000623426 3897 ntBASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DRB4X5D2U9 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms