Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 AL049869.1-201ENST00000556933 1402 ntBASIC7.79□□□□□ -1.16
LMO3Q8TAP4 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 KARSP2-201ENST00000415696 1639 ntBASIC7.79□□□□□ -1.16
LMO3Q8TAP4 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 OR7E117P-201ENST00000422682 1112 ntBASIC7.79□□□□□ -1.16
LMO3Q8TAP4 GAPDHP55-201ENST00000423136 803 ntBASIC7.79□□□□□ -1.16
LMO3Q8TAP4 BX119917.1-201ENST00000432517 502 ntBASIC7.79□□□□□ -1.16
LMO3Q8TAP4 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 AC018892.2-201ENST00000457656 693 ntBASIC7.79□□□□□ -1.16
LMO3Q8TAP4 RN7SL91P-201ENST00000469313 291 ntBASIC7.79□□□□□ -1.16
LMO3Q8TAP4 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 OR4N3P-201ENST00000559395 818 ntBASIC7.79□□□□□ -1.16
LMO3Q8TAP4 AC243312.1-201ENST00000570582 275 ntBASIC7.79□□□□□ -1.16
LMO3Q8TAP4 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 AC135068.4-201ENST00000622949 925 ntBASIC7.79□□□□□ -1.16
LMO3Q8TAP4 AC241377.2-202ENST00000636462 997 ntBASIC7.79□□□□□ -1.16
LMO3Q8TAP4 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 BX322650.1-201ENST00000332359 2143 ntBASIC7.79□□□□□ -1.16
LMO3Q8TAP4 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC7.79□□□□□ -1.16
LMO3Q8TAP4 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.78□□□□□ -1.16
LMO3Q8TAP4 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 AC132219.2-201ENST00000624416 2327 ntBASIC7.78□□□□□ -1.16
LMO3Q8TAP4 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 AC090114.1-201ENST00000393266 448 ntBASIC7.78□□□□□ -1.16
LMO3Q8TAP4 AC010740.1-201ENST00000417035 684 ntBASIC7.78□□□□□ -1.16
LMO3Q8TAP4 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 AC093107.1-201ENST00000422772 609 ntBASIC7.78□□□□□ -1.16
LMO3Q8TAP4 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 OR5P4P-201ENST00000424698 917 ntBASIC7.78□□□□□ -1.16
LMO3Q8TAP4 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 SNX18P9-201ENST00000440580 835 ntBASIC7.78□□□□□ -1.16
LMO3Q8TAP4 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 AC016559.1-201ENST00000511420 199 ntBASIC7.78□□□□□ -1.16
LMO3Q8TAP4 EIF3KP1-201ENST00000513279 656 ntBASIC7.78□□□□□ -1.16
LMO3Q8TAP4 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 RN7SL311P-201ENST00000579858 306 ntBASIC7.78□□□□□ -1.16
LMO3Q8TAP4 RN7SL778P-201ENST00000607160 297 ntBASIC7.78□□□□□ -1.16
LMO3Q8TAP4 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms