Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PHC3Q8NDX5 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PHC3Q8NDX5 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
PHC3Q8NDX5 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PHC3Q8NDX5 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC8.13□□□□□ -1.11
PHC3Q8NDX5 SOCS5P4-201ENST00000454743 1566 ntBASIC8.13□□□□□ -1.11
PHC3Q8NDX5 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.13□□□□□ -1.11
PHC3Q8NDX5 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PHC3Q8NDX5 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PHC3Q8NDX5 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC010680.2-201ENST00000603521 2117 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC241584.2-201ENST00000637142 2090 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 PSMC1-202ENST00000543772 1389 ntTSL 2 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 FO393411.1-201ENST00000325612 420 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 RN7SKP25-201ENST00000362449 308 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 RN7SKP48-201ENST00000365031 328 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AL355615.1-201ENST00000406187 641 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 LINC01425-202ENST00000430060 760 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 KDM4A-AS1-203ENST00000434346 833 ntTSL 5 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC018738.1-201ENST00000441378 210 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC107983.1-201ENST00000442562 210 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AL445686.1-201ENST00000443086 348 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 MARK2P14-201ENST00000449657 628 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC126615.1-201ENST00000470084 630 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 RN7SL403P-201ENST00000481783 305 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 RPL17P37-201ENST00000490729 548 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 RN7SL434P-201ENST00000495872 271 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC108073.1-201ENST00000508231 674 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 RNU6-311P-201ENST00000516224 102 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC090092.1-202ENST00000533591 685 ntTSL 5 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AP005597.1-201ENST00000534192 802 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AP006296.1-201ENST00000537438 499 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC092287.1-201ENST00000565782 463 ntTSL 3 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC023824.3-201ENST00000569003 562 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 CYP4A44P-201ENST00000569984 154 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AL049844.2-201ENST00000604280 628 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AL157392.4-201ENST00000609756 345 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC100847.1-201ENST00000611316 481 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC087742.2-201ENST00000616113 740 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC078880.5-201ENST00000617845 421 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AP002791.1-201ENST00000623291 381 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC016542.3-201ENST00000623520 619 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC139792.2-201ENST00000624218 587 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC116631.1-202ENST00000640984 683 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 OR5AC4P-202ENST00000642086 985 ntBASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 IPP-202ENST00000396478 3113 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC8.12□□□□□ -1.11
PHC3Q8NDX5 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PHC3Q8NDX5 AC107980.1-201ENST00000558671 3355 ntBASIC8.11□□□□□ -1.11
PHC3Q8NDX5 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PHC3Q8NDX5 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PHC3Q8NDX5 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
PHC3Q8NDX5 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PHC3Q8NDX5 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC8.11□□□□□ -1.11
PHC3Q8NDX5 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PHC3Q8NDX5 ADGRF2-201ENST00000296862 2127 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PHC3Q8NDX5 RTP3-201ENST00000296142 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PHC3Q8NDX5 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC8.11□□□□□ -1.11
PHC3Q8NDX5 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC8.11□□□□□ -1.11
PHC3Q8NDX5 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PHC3Q8NDX5 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
PHC3Q8NDX5 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PHC3Q8NDX5 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms