Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC8.7□□□□□ -1.02
HLA-DOAP06340 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC8.7□□□□□ -1.02
HLA-DOAP06340 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-DOAP06340 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
HLA-DOAP06340 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-DOAP06340 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-DOAP06340 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
HLA-DOAP06340 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-DOAP06340 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-DOAP06340 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-DOAP06340 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-DOAP06340 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-DOAP06340 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 FAUP2-201ENST00000394301 401 ntBASIC8.69□□□□□ -1.02
HLA-DOAP06340 OR52N3P-201ENST00000413417 934 ntBASIC8.69□□□□□ -1.02
HLA-DOAP06340 NPM1P30-201ENST00000425092 828 ntBASIC8.69□□□□□ -1.02
HLA-DOAP06340 AC134879.1-201ENST00000426062 394 ntBASIC8.69□□□□□ -1.02
HLA-DOAP06340 SETP4-201ENST00000455717 868 ntBASIC8.69□□□□□ -1.02
HLA-DOAP06340 TECRP2-201ENST00000503270 928 ntBASIC8.69□□□□□ -1.02
HLA-DOAP06340 IGLV1-62-201ENST00000518003 441 ntBASIC8.69□□□□□ -1.02
HLA-DOAP06340 SSU72P6-201ENST00000532644 488 ntBASIC8.69□□□□□ -1.02
HLA-DOAP06340 DCN-215ENST00000550099 719 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 RN7SL14P-201ENST00000579715 298 ntBASIC8.69□□□□□ -1.02
HLA-DOAP06340 MIR378H-201ENST00000579966 83 ntBASIC8.69□□□□□ -1.02
HLA-DOAP06340 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 AC006453.3-201ENST00000635891 377 ntBASIC8.69□□□□□ -1.02
HLA-DOAP06340 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-DOAP06340 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-DOAP06340 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 AC131649.2-201ENST00000624925 4439 ntBASIC8.69□□□□□ -1.02
HLA-DOAP06340 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-DOAP06340 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-DOAP06340 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-DOAP06340 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-DOAP06340 THAP12P6-201ENST00000431978 2310 ntBASIC8.69□□□□□ -1.02
HLA-DOAP06340 RPL12P38-202ENST00000588627 2319 ntBASIC8.69□□□□□ -1.02
HLA-DOAP06340 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-DOAP06340 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 MFSD8-256ENST00000641949 1640 ntBASIC8.69□□□□□ -1.02
HLA-DOAP06340 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
HLA-DOAP06340 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
HLA-DOAP06340 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-DOAP06340 AC016582.1-202ENST00000636341 2982 ntBASIC8.68□□□□□ -1.02
HLA-DOAP06340 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-DOAP06340 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-DOAP06340 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-DOAP06340 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
HLA-DOAP06340 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
HLA-DOAP06340 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
HLA-DOAP06340 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-DOAP06340 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-DOAP06340 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-DOAP06340 SETP22-201ENST00000412243 957 ntBASIC8.68□□□□□ -1.02
HLA-DOAP06340 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC8.68□□□□□ -1.02
HLA-DOAP06340 CYCSP44-201ENST00000448560 313 ntBASIC8.68□□□□□ -1.02
HLA-DOAP06340 SCDP1-201ENST00000455244 1081 ntBASIC8.68□□□□□ -1.02
HLA-DOAP06340 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC8.68□□□□□ -1.02
HLA-DOAP06340 AL133480.2-201ENST00000456723 487 ntBASIC8.68□□□□□ -1.02
HLA-DOAP06340 RN7SL751P-201ENST00000473281 284 ntBASIC8.68□□□□□ -1.02
HLA-DOAP06340 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC8.68□□□□□ -1.02
HLA-DOAP06340 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC8.68□□□□□ -1.02
HLA-DOAP06340 AC122714.1-201ENST00000502510 459 ntBASIC8.68□□□□□ -1.02
HLA-DOAP06340 NACAP6-201ENST00000509572 622 ntBASIC8.68□□□□□ -1.02
HLA-DOAP06340 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC8.68□□□□□ -1.02
HLA-DOAP06340 AP001646.2-201ENST00000528645 1156 ntBASIC8.68□□□□□ -1.02
HLA-DOAP06340 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-DOAP06340 OR7E19P-202ENST00000589942 844 ntBASIC8.68□□□□□ -1.02
HLA-DOAP06340 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC8.68□□□□□ -1.02
HLA-DOAP06340 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-DOAP06340 AL031777.2-201ENST00000611953 196 ntBASIC8.68□□□□□ -1.02
HLA-DOAP06340 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC8.68□□□□□ -1.02
HLA-DOAP06340 AC091059.2-201ENST00000623355 614 ntBASIC8.68□□□□□ -1.02
HLA-DOAP06340 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
HLA-DOAP06340 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-DOAP06340 RBM5-AS1-201ENST00000630404 1386 ntBASIC8.68□□□□□ -1.02
HLA-DOAP06340 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC8.68□□□□□ -1.02
HLA-DOAP06340 AL445250.1-203ENST00000641829 1535 ntBASIC8.68□□□□□ -1.02
HLA-DOAP06340 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-DOAP06340 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-DOAP06340 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-DOAP06340 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-DOAP06340 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.68□□□□□ -1.02
HLA-DOAP06340 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
HLA-DOAP06340 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.68□□□□□ -1.02
HLA-DOAP06340 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms