Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RN7SKP131-201ENST00000410698 301 ntBASIC7.72□□□□□ -1.17
SLC1A1P43005 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.72□□□□□ -1.17
SLC1A1P43005 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.72□□□□□ -1.17
SLC1A1P43005 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC7.72□□□□□ -1.17
SLC1A1P43005 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.72□□□□□ -1.17
SLC1A1P43005 MORF4L1P5-201ENST00000433352 961 ntBASIC7.72□□□□□ -1.17
SLC1A1P43005 RPL24P8-201ENST00000446071 474 ntBASIC7.72□□□□□ -1.17
SLC1A1P43005 NUCKS1P1-201ENST00000452067 703 ntBASIC7.72□□□□□ -1.17
SLC1A1P43005 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.72□□□□□ -1.17
SLC1A1P43005 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC7.72□□□□□ -1.17
SLC1A1P43005 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC7.72□□□□□ -1.17
SLC1A1P43005 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 AC146944.3-201ENST00000509969 371 ntBASIC7.72□□□□□ -1.17
SLC1A1P43005 AC027801.3-201ENST00000515049 698 ntBASIC7.72□□□□□ -1.17
SLC1A1P43005 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC7.72□□□□□ -1.17
SLC1A1P43005 OR6M3P-201ENST00000531567 700 ntBASIC7.72□□□□□ -1.17
SLC1A1P43005 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.72□□□□□ -1.17
SLC1A1P43005 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC7.72□□□□□ -1.17
SLC1A1P43005 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC7.72□□□□□ -1.17
SLC1A1P43005 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC7.72□□□□□ -1.17
SLC1A1P43005 AC092133.1-201ENST00000565828 719 ntBASIC7.72□□□□□ -1.17
SLC1A1P43005 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.72□□□□□ -1.17
SLC1A1P43005 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.72□□□□□ -1.17
SLC1A1P43005 AC090099.1-204ENST00000623626 849 ntBASIC7.72□□□□□ -1.17
SLC1A1P43005 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.72□□□□□ -1.17
SLC1A1P43005 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.72□□□□□ -1.17
SLC1A1P43005 CASC19-232ENST00000641480 1244 ntBASIC7.72□□□□□ -1.17
SLC1A1P43005 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
SLC1A1P43005 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.72□□□□□ -1.17
SLC1A1P43005 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.72□□□□□ -1.17
SLC1A1P43005 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 SLC9B1P3-201ENST00000452667 1334 ntBASIC7.72□□□□□ -1.17
SLC1A1P43005 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.72□□□□□ -1.17
SLC1A1P43005 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
SLC1A1P43005 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SLC1A1P43005 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
SLC1A1P43005 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.71□□□□□ -1.17
SLC1A1P43005 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.71□□□□□ -1.17
SLC1A1P43005 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.71□□□□□ -1.17
SLC1A1P43005 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SLC1A1P43005 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SLC1A1P43005 RBMX2P2-201ENST00000257020 946 ntBASIC7.71□□□□□ -1.18
SLC1A1P43005 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
SLC1A1P43005 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SLC1A1P43005 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
SLC1A1P43005 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SLC1A1P43005 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC7.71□□□□□ -1.18
SLC1A1P43005 AC020983.1-201ENST00000417063 543 ntBASIC7.71□□□□□ -1.18
SLC1A1P43005 EEF1GP7-201ENST00000422983 703 ntBASIC7.71□□□□□ -1.18
SLC1A1P43005 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC7.71□□□□□ -1.18
SLC1A1P43005 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SLC1A1P43005 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC7.71□□□□□ -1.18
SLC1A1P43005 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC7.71□□□□□ -1.18
SLC1A1P43005 RPL34P29-201ENST00000491411 325 ntBASIC7.71□□□□□ -1.18
SLC1A1P43005 AC112225.1-201ENST00000508230 297 ntBASIC7.71□□□□□ -1.18
SLC1A1P43005 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC7.71□□□□□ -1.18
SLC1A1P43005 AC026700.1-201ENST00000512074 544 ntBASIC7.71□□□□□ -1.18
SLC1A1P43005 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC7.71□□□□□ -1.18
SLC1A1P43005 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC7.71□□□□□ -1.18
SLC1A1P43005 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SLC1A1P43005 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC7.71□□□□□ -1.18
SLC1A1P43005 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.71□□□□□ -1.18
SLC1A1P43005 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.71□□□□□ -1.18
SLC1A1P43005 AC005154.1-216ENST00000582145 1101 ntTSL 5 BASIC7.71□□□□□ -1.18
SLC1A1P43005 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC7.71□□□□□ -1.18
SLC1A1P43005 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SLC1A1P43005 CRYAB-216ENST00000616970 977 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
SLC1A1P43005 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.71□□□□□ -1.18
SLC1A1P43005 TSHZ2-205ENST00000626626 670 ntBASIC7.71□□□□□ -1.18
SLC1A1P43005 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.71□□□□□ -1.18
SLC1A1P43005 AL596275.2-203ENST00000641951 371 ntBASIC7.71□□□□□ -1.18
SLC1A1P43005 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
SLC1A1P43005 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SLC1A1P43005 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
SLC1A1P43005 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
SLC1A1P43005 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.71□□□□□ -1.18
SLC1A1P43005 DDX10P2-201ENST00000417796 2614 ntBASIC7.71□□□□□ -1.18
SLC1A1P43005 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SLC1A1P43005 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.71□□□□□ -1.18
SLC1A1P43005 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.71□□□□□ -1.18
SLC1A1P43005 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
SLC1A1P43005 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SLC1A1P43005 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.71□□□□□ -1.18
SLC1A1P43005 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.71□□□□□ -1.18
SLC1A1P43005 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
SLC1A1P43005 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
SLC1A1P43005 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.7□□□□□ -1.18
SLC1A1P43005 KYNUP1-201ENST00000466683 1406 ntBASIC7.7□□□□□ -1.18
SLC1A1P43005 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SLC1A1P43005 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SLC1A1P43005 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
SLC1A1P43005 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SLC1A1P43005 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SLC1A1P43005 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms