Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 DEFB105B-201ENST00000335510 331 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 YWHAZP3-201ENST00000415292 738 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 YBX1P8-201ENST00000421881 943 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 RBMY2YP-201ENST00000423333 912 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 PAICSP1-201ENST00000425324 1217 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC068137.1-201ENST00000429272 584 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC098483.1-202ENST00000436515 967 ntTSL 2 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC013439.1-201ENST00000449965 1239 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC138089.1-201ENST00000450847 967 ntTSL 2 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 RN7SL201P-201ENST00000482306 296 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AL031073.1-201ENST00000503029 1139 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 DKK2-202ENST00000510463 908 ntTSL 3 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 SCARNA20.3-201ENST00000516913 131 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 RN7SKP233-201ENST00000517005 110 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 GZMB-205ENST00000526004 819 ntTSL 3 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC009269.2-201ENST00000559892 474 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC009171.1-201ENST00000572673 266 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 OR7A18P-201ENST00000600416 277 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AL136985.2-201ENST00000607372 535 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AL731533.2-201ENST00000607898 578 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 EIF5P2-201ENST00000618904 1035 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AP000851.2-201ENST00000629499 721 ntTSL 3 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 EEF1A1P2-201ENST00000553854 1447 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 CASC20-201ENST00000415932 1484 ntTSL 5 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC079178.2-201ENST00000439323 1624 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AP000866.6-201ENST00000638898 3579 ntBASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 PAH-201ENST00000307000 2466 ntTSL 5 BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 OR52K3P-202ENST00000641797 1729 ntBASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 MFSD8-227ENST00000641393 4069 ntBASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 AC110716.2-201ENST00000563865 3945 ntBASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 RPSAP42-201ENST00000403415 878 ntBASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 C2orf74-202ENST00000426997 879 ntAPPRIS P2 TSL 3 BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 RN7SL587P-201ENST00000459853 281 ntBASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 RN7SL325P-201ENST00000460434 283 ntBASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 AC253576.1-201ENST00000511645 1156 ntBASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 AP003174.3-201ENST00000537926 516 ntBASIC6.88□□□□□ -1.31
CCNB1IP1Q9NPC3 CHCHD3P2-201ENST00000550751 639 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms