Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 CUX2P1-201ENST00000606426 298 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 AC135050.6-202ENST00000613584 392 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 AL354696.1-201ENST00000614652 497 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC7.9□□□□□ -1.15
CDK5RAP1Q96SZ6 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
CDK5RAP1Q96SZ6 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
CDK5RAP1Q96SZ6 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.9□□□□□ -1.15
CDK5RAP1Q96SZ6 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
CDK5RAP1Q96SZ6 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
CDK5RAP1Q96SZ6 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CDK5RAP1Q96SZ6 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
CDK5RAP1Q96SZ6 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC7.9□□□□□ -1.15
CDK5RAP1Q96SZ6 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CDK5RAP1Q96SZ6 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 TUBBP10-201ENST00000427668 1301 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 RNA5SP448-201ENST00000363151 111 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC113608.1-201ENST00000398740 305 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 SNORA2C-201ENST00000408564 137 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC023141.10-201ENST00000415634 200 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 FAM204CP-201ENST00000424489 642 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AL954705.1-201ENST00000435277 559 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC013429.1-201ENST00000456604 422 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 RN7SL516P-201ENST00000496127 297 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC016550.3-201ENST00000515706 767 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 MIR4786-201ENST00000583954 80 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AL512413.1-201ENST00000606489 382 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC006335.3-201ENST00000613408 292 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC143336.1-201ENST00000614164 836 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 RN7SL680P-201ENST00000620379 299 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 FO681491.1-202ENST00000623392 737 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC129908.1-201ENST00000624553 648 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AP000842.4-201ENST00000638781 748 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC099654.11-201ENST00000638857 294 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC068860.1-201ENST00000623701 3736 ntBASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.89□□□□□ -1.15
CDK5RAP1Q96SZ6 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 FOLH1B-202ENST00000529567 2145 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms