Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RPL12P38-202ENST00000588627 2319 ntBASIC8.51□□□□□ -1.05
POLR2AP24928 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
POLR2AP24928 AL360295.1-201ENST00000425435 1824 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
POLR2AP24928 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
POLR2AP24928 CYB5R4-202ENST00000369681 9252 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
POLR2AP24928 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC8.51□□□□□ -1.05
POLR2AP24928 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC8.51□□□□□ -1.05
POLR2AP24928 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
POLR2AP24928 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC8.51□□□□□ -1.05
POLR2AP24928 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
POLR2AP24928 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC8.51□□□□□ -1.05
POLR2AP24928 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC8.51□□□□□ -1.05
POLR2AP24928 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC8.51□□□□□ -1.05
POLR2AP24928 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC8.51□□□□□ -1.05
POLR2AP24928 RPS18P1-201ENST00000447840 458 ntBASIC8.51□□□□□ -1.05
POLR2AP24928 AL096803.1-201ENST00000456921 1021 ntBASIC8.51□□□□□ -1.05
POLR2AP24928 CCNJP2-201ENST00000457810 1163 ntBASIC8.51□□□□□ -1.05
POLR2AP24928 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
POLR2AP24928 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC8.51□□□□□ -1.05
POLR2AP24928 AC007448.1-201ENST00000582714 234 ntBASIC8.51□□□□□ -1.05
POLR2AP24928 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
POLR2AP24928 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
POLR2AP24928 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
POLR2AP24928 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
POLR2AP24928 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
POLR2AP24928 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
POLR2AP24928 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC8.51□□□□□ -1.05
POLR2AP24928 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC8.51□□□□□ -1.05
POLR2AP24928 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
POLR2AP24928 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC8.5□□□□□ -1.05
POLR2AP24928 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC8.5□□□□□ -1.05
POLR2AP24928 MYH8-201ENST00000403437 6041 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
POLR2AP24928 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC8.5□□□□□ -1.05
POLR2AP24928 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
POLR2AP24928 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
POLR2AP24928 POLR3B-202ENST00000539066 4118 ntTSL 2 BASIC8.5□□□□□ -1.05
POLR2AP24928 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
POLR2AP24928 MIR575-201ENST00000385013 94 ntBASIC8.5□□□□□ -1.05
POLR2AP24928 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC8.5□□□□□ -1.05
POLR2AP24928 AL773545.3-201ENST00000414297 706 ntBASIC8.5□□□□□ -1.05
POLR2AP24928 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
POLR2AP24928 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC8.5□□□□□ -1.05
POLR2AP24928 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC8.5□□□□□ -1.05
POLR2AP24928 EEF1A1P17-201ENST00000547505 1275 ntBASIC8.5□□□□□ -1.05
POLR2AP24928 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC8.5□□□□□ -1.05
POLR2AP24928 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC8.5□□□□□ -1.05
POLR2AP24928 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC8.5□□□□□ -1.05
POLR2AP24928 AL121809.2-201ENST00000613169 341 ntBASIC8.5□□□□□ -1.05
POLR2AP24928 AC073857.1-201ENST00000625082 1054 ntBASIC8.5□□□□□ -1.05
POLR2AP24928 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
POLR2AP24928 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
POLR2AP24928 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC8.5□□□□□ -1.05
POLR2AP24928 GABRB3-204ENST00000541819 5934 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
POLR2AP24928 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
POLR2AP24928 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
POLR2AP24928 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
POLR2AP24928 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
POLR2AP24928 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
POLR2AP24928 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC8.5□□□□□ -1.05
POLR2AP24928 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.5□□□□□ -1.05
POLR2AP24928 HMGN1P2-201ENST00000445197 310 ntBASIC8.5□□□□□ -1.05
POLR2AP24928 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC8.5□□□□□ -1.05
POLR2AP24928 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
POLR2AP24928 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC8.5□□□□□ -1.05
POLR2AP24928 OR52K3P-201ENST00000531655 943 ntBASIC8.5□□□□□ -1.05
POLR2AP24928 SETP17-201ENST00000534163 817 ntBASIC8.5□□□□□ -1.05
POLR2AP24928 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC8.5□□□□□ -1.05
POLR2AP24928 MIR6778-201ENST00000617912 73 ntBASIC8.5□□□□□ -1.05
POLR2AP24928 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC8.5□□□□□ -1.05
POLR2AP24928 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
POLR2AP24928 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
POLR2AP24928 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.49□□□□□ -1.05
POLR2AP24928 SLC12A1-203ENST00000396577 4708 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.05
POLR2AP24928 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
POLR2AP24928 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
POLR2AP24928 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
POLR2AP24928 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
POLR2AP24928 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC8.49□□□□□ -1.05
POLR2AP24928 SSFA2-203ENST00000409136 3610 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
POLR2AP24928 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
POLR2AP24928 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
POLR2AP24928 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC8.49□□□□□ -1.05
POLR2AP24928 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
POLR2AP24928 ITGB6-211ENST00000620391 4401 ntTSL 3 BASIC8.49□□□□□ -1.05
POLR2AP24928 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
POLR2AP24928 LUCAT1-203ENST00000513626 2672 ntTSL 2 BASIC8.49□□□□□ -1.05
POLR2AP24928 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC8.49□□□□□ -1.05
POLR2AP24928 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
POLR2AP24928 AL136100.1-201ENST00000407696 330 ntBASIC8.49□□□□□ -1.05
POLR2AP24928 RN7SKP254-201ENST00000410685 310 ntBASIC8.49□□□□□ -1.05
POLR2AP24928 Z83313.1-201ENST00000433780 718 ntBASIC8.49□□□□□ -1.05
POLR2AP24928 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC8.49□□□□□ -1.05
POLR2AP24928 EEF1B2P3-201ENST00000447718 678 ntBASIC8.49□□□□□ -1.05
POLR2AP24928 RPL34P34-201ENST00000465389 354 ntBASIC8.49□□□□□ -1.05
POLR2AP24928 AC021006.1-201ENST00000489849 553 ntBASIC8.49□□□□□ -1.05
POLR2AP24928 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC8.49□□□□□ -1.05
POLR2AP24928 AC091917.2-201ENST00000505002 744 ntBASIC8.49□□□□□ -1.05
POLR2AP24928 IGLVVII-41-1-201ENST00000518405 151 ntBASIC8.49□□□□□ -1.05
POLR2AP24928 OR5BK1P-201ENST00000550421 823 ntBASIC8.49□□□□□ -1.05
POLR2AP24928 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms