Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC013731.1-201ENST00000604340 883 ntBASIC6.92□□□□□ -1.3
NCK1P16333 AF146191.1-201ENST00000604941 889 ntBASIC6.92□□□□□ -1.3
NCK1P16333 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC6.92□□□□□ -1.3
NCK1P16333 AC245028.3-201ENST00000618197 285 ntBASIC6.92□□□□□ -1.3
NCK1P16333 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC6.92□□□□□ -1.3
NCK1P16333 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NCK1P16333 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC6.92□□□□□ -1.3
NCK1P16333 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NCK1P16333 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.92□□□□□ -1.3
NCK1P16333 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NCK1P16333 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
NCK1P16333 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NCK1P16333 AP001347.1-201ENST00000428809 1332 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NCK1P16333 AC024610.2-203ENST00000636084 1348 ntTSL 5 BASIC6.92□□□□□ -1.3
NCK1P16333 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.92□□□□□ -1.3
NCK1P16333 OR52K3P-202ENST00000641797 1729 ntBASIC6.92□□□□□ -1.3
NCK1P16333 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.92□□□□□ -1.3
NCK1P16333 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NCK1P16333 AC107980.1-201ENST00000558671 3355 ntBASIC6.92□□□□□ -1.3
NCK1P16333 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC6.92□□□□□ -1.3
NCK1P16333 WNK1-220ENST00000574564 1401 ntBASIC6.92□□□□□ -1.3
NCK1P16333 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NCK1P16333 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.92□□□□□ -1.3
NCK1P16333 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NCK1P16333 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NCK1P16333 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.91□□□□□ -1.3
NCK1P16333 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
NCK1P16333 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
NCK1P16333 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
NCK1P16333 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NCK1P16333 AC104581.5-201ENST00000624171 7141 ntBASIC6.91□□□□□ -1.3
NCK1P16333 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NCK1P16333 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NCK1P16333 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NCK1P16333 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NCK1P16333 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NCK1P16333 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.91□□□□□ -1.3
NCK1P16333 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NCK1P16333 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.91□□□□□ -1.3
NCK1P16333 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NCK1P16333 AL353898.3-201ENST00000624679 1755 ntBASIC6.91□□□□□ -1.3
NCK1P16333 AL078621.1-201ENST00000272567 768 ntBASIC6.91□□□□□ -1.3
NCK1P16333 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC6.91□□□□□ -1.3
NCK1P16333 RPL7AP72-201ENST00000417266 768 ntBASIC6.91□□□□□ -1.3
NCK1P16333 YBX1P8-201ENST00000421881 943 ntBASIC6.91□□□□□ -1.3
NCK1P16333 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC6.91□□□□□ -1.3
NCK1P16333 CYP4F32P-201ENST00000426492 504 ntBASIC6.91□□□□□ -1.3
NCK1P16333 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC6.91□□□□□ -1.3
NCK1P16333 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC6.91□□□□□ -1.3
NCK1P16333 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC6.91□□□□□ -1.3
NCK1P16333 SNX18P8-201ENST00000455120 874 ntBASIC6.91□□□□□ -1.3
NCK1P16333 AC009153.1-201ENST00000485799 496 ntBASIC6.91□□□□□ -1.3
NCK1P16333 RN7SL869P-201ENST00000497032 300 ntBASIC6.91□□□□□ -1.3
NCK1P16333 LINC02057-201ENST00000503882 640 ntTSL 2 BASIC6.91□□□□□ -1.3
NCK1P16333 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NCK1P16333 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NCK1P16333 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NCK1P16333 PTPN20-228ENST00000513266 818 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NCK1P16333 AC027801.3-201ENST00000515049 698 ntBASIC6.91□□□□□ -1.3
NCK1P16333 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC6.91□□□□□ -1.3
NCK1P16333 AC010463.3-201ENST00000594077 500 ntBASIC6.91□□□□□ -1.3
NCK1P16333 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC6.91□□□□□ -1.3
NCK1P16333 ANKRD20A19P-203ENST00000602724 295 ntBASIC6.91□□□□□ -1.3
NCK1P16333 AC004852.1-201ENST00000605206 154 ntBASIC6.91□□□□□ -1.3
NCK1P16333 AL157392.3-206ENST00000614899 822 ntTSL 5 BASIC6.91□□□□□ -1.3
NCK1P16333 AC022743.1-201ENST00000624990 664 ntBASIC6.91□□□□□ -1.3
NCK1P16333 SNORA43.5-201ENST00000631270 138 ntBASIC6.91□□□□□ -1.3
NCK1P16333 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC6.91□□□□□ -1.3
NCK1P16333 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.91□□□□□ -1.3
NCK1P16333 CASC19-232ENST00000641480 1244 ntBASIC6.91□□□□□ -1.3
NCK1P16333 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NCK1P16333 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.91□□□□□ -1.3
NCK1P16333 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.91□□□□□ -1.3
NCK1P16333 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NCK1P16333 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NCK1P16333 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.91□□□□□ -1.3
NCK1P16333 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
NCK1P16333 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NCK1P16333 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NCK1P16333 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
NCK1P16333 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.9□□□□□ -1.3
NCK1P16333 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NCK1P16333 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NCK1P16333 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NCK1P16333 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NCK1P16333 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NCK1P16333 NR1I3-206ENST00000367984 1059 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NCK1P16333 NPM1P46-201ENST00000399556 865 ntBASIC6.9□□□□□ -1.3
NCK1P16333 AL593856.1-201ENST00000419949 805 ntBASIC6.9□□□□□ -1.3
NCK1P16333 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
NCK1P16333 RPL4P4-201ENST00000422486 1284 ntBASIC6.9□□□□□ -1.3
NCK1P16333 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.9□□□□□ -1.3
NCK1P16333 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC6.9□□□□□ -1.3
NCK1P16333 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC6.9□□□□□ -1.3
NCK1P16333 UBE2R2-AS1-201ENST00000454429 647 ntTSL 5 BASIC6.9□□□□□ -1.3
NCK1P16333 AC040975.1-201ENST00000472104 316 ntBASIC6.9□□□□□ -1.3
NCK1P16333 RN7SL505P-201ENST00000482644 293 ntBASIC6.9□□□□□ -1.3
NCK1P16333 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.9□□□□□ -1.3
NCK1P16333 SUMO2P7-201ENST00000511179 285 ntBASIC6.9□□□□□ -1.3
NCK1P16333 AC120036.3-201ENST00000517826 292 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms