Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7□□□□□ -1.29
SNX18Q96RF0 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
SNX18Q96RF0 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
SNX18Q96RF0 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC7□□□□□ -1.29
SNX18Q96RF0 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SNX18Q96RF0 CUBNP3-201ENST00000457461 1784 ntBASIC7□□□□□ -1.29
SNX18Q96RF0 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SNX18Q96RF0 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 FMO10P-201ENST00000455032 1493 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 RBM5-AS1-201ENST00000630404 1386 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 PSMD10-203ENST00000340200 713 ntTSL 3 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 SNORA40.4-201ENST00000390971 128 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 RBMY2GP-201ENST00000418671 1034 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 VN1R3-201ENST00000418822 919 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 GYG1P2-201ENST00000426437 1006 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 RBMY2NP-201ENST00000434454 1028 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 AL135929.1-201ENST00000449287 552 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 FCF1P7-201ENST00000451185 558 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 AC092569.1-201ENST00000455192 258 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 RN7SL862P-201ENST00000491550 298 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 RN7SL388P-201ENST00000498736 339 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 AC084871.2-201ENST00000503355 464 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 SUMO2P7-201ENST00000511179 285 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 TBC1D21-202ENST00000535547 1005 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 FDPSP3-201ENST00000556903 1013 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 AC122134.1-202ENST00000569111 1201 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 AC009171.1-201ENST00000572673 266 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 AC098850.2-201ENST00000578710 686 ntTSL 5 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 AP001020.1-201ENST00000579595 464 ntTSL 3 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 RPL21P136-201ENST00000605378 396 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 AC138904.2-201ENST00000614412 107 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 AC119674.1-201ENST00000641611 1210 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 SCHLAP1-201ENST00000629145 1436 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 MROH3P-201ENST00000435735 2676 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 LINC02128-205ENST00000641755 1334 ntBASIC6.99□□□□□ -1.29
SNX18Q96RF0 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
SNX18Q96RF0 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNX18Q96RF0 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
SNX18Q96RF0 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNX18Q96RF0 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNX18Q96RF0 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
SNX18Q96RF0 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.98□□□□□ -1.29
SNX18Q96RF0 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC6.98□□□□□ -1.29
SNX18Q96RF0 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SNX18Q96RF0 AL669831.5-218ENST00000591702 1873 ntBASIC6.98□□□□□ -1.29
SNX18Q96RF0 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.98□□□□□ -1.29
SNX18Q96RF0 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
SNX18Q96RF0 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SNX18Q96RF0 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.98□□□□□ -1.29
SNX18Q96RF0 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNX18Q96RF0 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC6.98□□□□□ -1.29
SNX18Q96RF0 AC096745.2-201ENST00000627783 1914 ntBASIC6.98□□□□□ -1.29
SNX18Q96RF0 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNX18Q96RF0 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.98□□□□□ -1.29
SNX18Q96RF0 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC6.98□□□□□ -1.29
SNX18Q96RF0 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
SNX18Q96RF0 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SNX18Q96RF0 RN7SKP76-201ENST00000364419 323 ntBASIC6.98□□□□□ -1.29
SNX18Q96RF0 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SNX18Q96RF0 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.98□□□□□ -1.29
SNX18Q96RF0 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC6.98□□□□□ -1.29
SNX18Q96RF0 MTND6P1-201ENST00000417434 424 ntBASIC6.98□□□□□ -1.29
SNX18Q96RF0 HSFY1P1-201ENST00000423928 1178 ntBASIC6.98□□□□□ -1.29
SNX18Q96RF0 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms