Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LYG2-206ENST00000626374 650 ntTSL 5 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 AC017104.4-201ENST00000636283 1592 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 AP000356.4-201ENST00000639500 172 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 SEMA4D-202ENST00000356444 4503 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 SOX9-AS1-204ENST00000434703 3032 ntTSL 2 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 AC018521.7-201ENST00000580282 2927 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 PSMA3-AS1-204ENST00000554360 2475 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AC138907.1-201ENST00000570183 2405 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 SOX5-212ENST00000541536 2365 ntTSL 2 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 KCNT2-201ENST00000294725 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 SYT6-202ENST00000607941 4352 ntTSL 2 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 FAM171A1-201ENST00000378116 3952 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 SYNE1-230ENST00000495090 1907 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 KIAA0100-202ENST00000528896 7407 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 APTX-207ENST00000397172 1740 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 TENM2-207ENST00000520394 8034 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 PASD1-201ENST00000370357 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 DAB2-217ENST00000545653 4537 ntTSL 5 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 MCOLN2-202ENST00000370608 2871 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 IPO5P1-201ENST00000593576 2887 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 MRPS33-201ENST00000324787 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AC106800.1-201ENST00000501221 1362 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 ZNF43-202ENST00000357491 5249 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 RNU1-21P-201ENST00000363327 163 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 RNA5SP69-201ENST00000364477 117 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 SNORA75-201ENST00000384158 137 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 RNU6-1009P-201ENST00000390996 107 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 SNORD115-47-201ENST00000391226 86 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 RPL7P27-201ENST00000403775 720 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 SNORA11.5-201ENST00000408163 128 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 RN7SKP166-201ENST00000410812 305 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 IPO9-AS1-202ENST00000421159 456 ntTSL 3 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AL161638.2-201ENST00000427319 507 ntTSL 3 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 RPS26P4-201ENST00000431743 355 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 PSMD6-AS1-201ENST00000462717 441 ntTSL 3 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 RPS4XP6-201ENST00000477670 797 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 RN7SL241P-201ENST00000482973 236 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 SEM1-210ENST00000488005 775 ntTSL 2 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AC114744.1-201ENST00000498116 666 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 MTCO3P9-201ENST00000506989 781 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 PPM1K-204ENST00000508256 923 ntTSL 2 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 RNU6-506P-201ENST00000516553 94 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AL050327.1-201ENST00000525424 507 ntTSL 4 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 OR9G2P-201ENST00000533326 880 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 AP000916.1-201ENST00000533869 835 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 RPL10P15-201ENST00000585756 315 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 FAM95B1-209ENST00000590863 789 ntTSL 2 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AL669942.1-201ENST00000611307 713 ntTSL 5 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 PTCHD3P1-201ENST00000612350 537 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 CR381653.1-205ENST00000623409 580 ntTSL 5 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 CGA-206ENST00000630630 832 ntTSL 2 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 LRRC77P-213ENST00000637727 880 ntBASIC9.68□□□□□ -0.86
LRCH3Q96II8 CASP8-201ENST00000264274 2540 ntTSL 5 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 AP000552.1-202ENST00000436681 3714 ntTSL 5 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 C5orf22-201ENST00000325366 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 SEC31B-201ENST00000370345 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 ZNF385B-203ENST00000409692 2109 ntTSL 5 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 EPB41L5-204ENST00000443902 3167 ntTSL 2 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 TRIM23-201ENST00000231524 4186 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 DAZL-202ENST00000399444 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 SYNJ2-204ENST00000367122 3029 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 TSHZ1-201ENST00000322038 4992 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 FAAH2-201ENST00000374900 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 GABRR1-207ENST00000621627 2857 ntTSL 5 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 TNIK-211ENST00000475336 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms