Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC130472.1-201ENST00000427885 309 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC6.98□□□□□ -1.29
SUMO3P55854 RPL35P8-201ENST00000433284 337 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 AL606752.1-201ENST00000435442 666 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC6.98□□□□□ -1.29
SUMO3P55854 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC6.98□□□□□ -1.29
SUMO3P55854 RPS13P2-201ENST00000437890 455 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.98□□□□□ -1.29
SUMO3P55854 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC6.98□□□□□ -1.29
SUMO3P55854 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.98□□□□□ -1.29
SUMO3P55854 PTMAP1-205ENST00000455552 325 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 RPL12P40-201ENST00000467028 488 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.98□□□□□ -1.29
SUMO3P55854 RN7SL635P-201ENST00000492123 296 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 AC107956.2-201ENST00000496042 454 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 LINC01096-201ENST00000501050 1263 ntTSL 2 BASIC6.98□□□□□ -1.29
SUMO3P55854 AL445187.1-201ENST00000502685 260 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 Z99943.2-201ENST00000507585 266 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 DKK2-202ENST00000510463 908 ntTSL 3 BASIC6.98□□□□□ -1.29
SUMO3P55854 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC6.98□□□□□ -1.29
SUMO3P55854 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.98□□□□□ -1.29
SUMO3P55854 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC6.98□□□□□ -1.29
SUMO3P55854 CARD8-214ENST00000520007 614 ntTSL 2 BASIC6.98□□□□□ -1.29
SUMO3P55854 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.98□□□□□ -1.29
SUMO3P55854 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC6.98□□□□□ -1.29
SUMO3P55854 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.98□□□□□ -1.29
SUMO3P55854 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.98□□□□□ -1.29
SUMO3P55854 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.98□□□□□ -1.29
SUMO3P55854 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
SUMO3P55854 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC6.98□□□□□ -1.29
SUMO3P55854 AC005495.1-201ENST00000586611 1211 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 AC016629.2-201ENST00000597341 199 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC6.98□□□□□ -1.29
SUMO3P55854 AC005518.2-201ENST00000603254 282 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 AL096855.2-201ENST00000605785 369 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 AC025162.2-201ENST00000619602 560 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 AL669830.1-201ENST00000621457 656 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SUMO3P55854 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC6.98□□□□□ -1.29
SUMO3P55854 AC245505.2-201ENST00000553572 3055 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
SUMO3P55854 NLRP9P1-201ENST00000540920 2655 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC6.98□□□□□ -1.29
SUMO3P55854 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC6.98□□□□□ -1.29
SUMO3P55854 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
SUMO3P55854 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 AL359694.2-201ENST00000567753 1615 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 ATP5A1P10-201ENST00000622403 1603 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
SUMO3P55854 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
SUMO3P55854 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
SUMO3P55854 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC6.97□□□□□ -1.29
SUMO3P55854 MFSD8-227ENST00000641393 4069 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
SUMO3P55854 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
SUMO3P55854 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 RNA5SP79-201ENST00000365193 109 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC6.97□□□□□ -1.29
SUMO3P55854 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 PCNAP3-201ENST00000397222 778 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 AC092952.1-201ENST00000397646 1209 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 AL022100.1-202ENST00000421214 548 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC6.97□□□□□ -1.29
SUMO3P55854 AL137074.1-201ENST00000442640 465 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 AC073072.2-201ENST00000447425 348 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 RPS29P5-201ENST00000452777 171 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 AC007000.1-201ENST00000453064 794 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC6.97□□□□□ -1.29
SUMO3P55854 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC6.97□□□□□ -1.29
SUMO3P55854 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.97□□□□□ -1.29
SUMO3P55854 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC6.97□□□□□ -1.29
SUMO3P55854 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC6.97□□□□□ -1.29
SUMO3P55854 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SUMO3P55854 MTND3P3-201ENST00000505004 126 ntBASIC6.97□□□□□ -1.29
SUMO3P55854 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.97□□□□□ -1.29
SUMO3P55854 RPL37-205ENST00000509877 637 ntTSL 5 BASIC6.97□□□□□ -1.29
SUMO3P55854 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms