Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC090099.1-204ENST00000623626 849 ntBASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AC016722.2-201ENST00000429761 1835 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AL589993.1-201ENST00000407450 2524 ntBASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AC110716.2-201ENST00000563865 3945 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 RNA5SP378-201ENST00000363646 120 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 MIR614-201ENST00000385082 90 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AL109918.1-202ENST00000406724 436 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 FTH1P5-201ENST00000425761 545 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AL031736.1-201ENST00000449688 618 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 RPL10P6-201ENST00000457497 318 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 RPL12P40-201ENST00000467028 488 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 RN7SL36P-201ENST00000469345 276 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AC117392.1-201ENST00000487061 596 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 DKK2-202ENST00000510463 908 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 SCARNA20.1-201ENST00000516009 138 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AP002383.5-201ENST00000542623 1161 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 NDFIP1P1-201ENST00000543144 525 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 OR5BK1P-201ENST00000550421 823 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 PRELID3BP3-201ENST00000584963 545 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AC016629.2-201ENST00000597341 199 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AL137190.1-201ENST00000603288 282 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AC129492.5-201ENST00000603489 315 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AL096855.2-201ENST00000605785 369 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 MIR6732-201ENST00000619365 60 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 PFN1P2-202ENST00000621347 397 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AL451054.1-201ENST00000621770 772 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 Z93929.1-201ENST00000418200 1475 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 LINC01482-201ENST00000585484 2616 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 SPATA31C2-201ENST00000324915 3777 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AP003175.1-201ENST00000641383 6658 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms