Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
SSX3Q99909 EEF1A1P15-201ENST00000395772 1408 ntBASIC6.48□□□□□ -1.37
SSX3Q99909 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SSX3Q99909 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SSX3Q99909 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX3Q99909 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSX3Q99909 AC008498.2-201ENST00000624033 2322 ntBASIC6.48□□□□□ -1.37
SSX3Q99909 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX3Q99909 PSMC1P3-201ENST00000453822 1318 ntBASIC6.48□□□□□ -1.37
SSX3Q99909 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.48□□□□□ -1.37
SSX3Q99909 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX3Q99909 MFSD8-217ENST00000641178 4374 ntBASIC6.47□□□□□ -1.37
SSX3Q99909 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
SSX3Q99909 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 AL451064.2-201ENST00000623514 1654 ntBASIC6.47□□□□□ -1.37
SSX3Q99909 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SSX3Q99909 RNU1-21P-201ENST00000363327 163 ntBASIC6.47□□□□□ -1.37
SSX3Q99909 BEND6-201ENST00000370745 579 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX3Q99909 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.47□□□□□ -1.37
SSX3Q99909 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC6.47□□□□□ -1.37
SSX3Q99909 RPL4P4-201ENST00000422486 1284 ntBASIC6.47□□□□□ -1.37
SSX3Q99909 OR2L1P-201ENST00000422727 938 ntBASIC6.47□□□□□ -1.37
SSX3Q99909 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC6.47□□□□□ -1.37
SSX3Q99909 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX3Q99909 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC6.47□□□□□ -1.37
SSX3Q99909 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC6.47□□□□□ -1.37
SSX3Q99909 RPL7AP26-201ENST00000488538 813 ntBASIC6.47□□□□□ -1.37
SSX3Q99909 HNRNPA1P17-201ENST00000496620 924 ntBASIC6.47□□□□□ -1.37
SSX3Q99909 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SSX3Q99909 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC6.47□□□□□ -1.37
SSX3Q99909 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC6.47□□□□□ -1.37
SSX3Q99909 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC6.47□□□□□ -1.37
SSX3Q99909 CRYAB-203ENST00000525823 915 ntTSL 2 BASIC6.47□□□□□ -1.37
SSX3Q99909 AC026111.1-201ENST00000551090 1195 ntBASIC6.47□□□□□ -1.37
SSX3Q99909 AC116348.1-201ENST00000562525 528 ntTSL 3 BASIC6.47□□□□□ -1.37
SSX3Q99909 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC6.47□□□□□ -1.37
SSX3Q99909 RN7SL376P-201ENST00000578594 264 ntBASIC6.47□□□□□ -1.37
SSX3Q99909 RPL35AP25-201ENST00000584631 330 ntBASIC6.47□□□□□ -1.37
SSX3Q99909 ACP5-208ENST00000590420 301 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX3Q99909 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.47□□□□□ -1.37
SSX3Q99909 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC6.47□□□□□ -1.37
SSX3Q99909 AC004839.1-201ENST00000610269 501 ntBASIC6.47□□□□□ -1.37
SSX3Q99909 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC6.47□□□□□ -1.37
SSX3Q99909 CRYAB-216ENST00000616970 977 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SSX3Q99909 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX3Q99909 AC244093.5-201ENST00000619606 718 ntTSL 4 BASIC6.47□□□□□ -1.37
SSX3Q99909 AL353608.4-201ENST00000624487 1188 ntBASIC6.47□□□□□ -1.37
SSX3Q99909 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX3Q99909 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 AL133279.3-201ENST00000563140 2352 ntBASIC6.47□□□□□ -1.37
SSX3Q99909 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 LINC02071-201ENST00000514726 1723 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX3Q99909 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 ALG8-221ENST00000615266 1469 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX3Q99909 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX3Q99909 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC6.46□□□□□ -1.37
SSX3Q99909 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.46□□□□□ -1.37
SSX3Q99909 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SSX3Q99909 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SSX3Q99909 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC6.46□□□□□ -1.37
SSX3Q99909 AC016930.1-201ENST00000468766 2205 ntBASIC6.46□□□□□ -1.37
SSX3Q99909 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC6.46□□□□□ -1.37
SSX3Q99909 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SSX3Q99909 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.37
SSX3Q99909 GPM6A-221ENST00000515090 1500 ntTSL 2 BASIC6.46□□□□□ -1.37
SSX3Q99909 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SSX3Q99909 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
SSX3Q99909 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SSX3Q99909 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SSX3Q99909 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSX3Q99909 KRTAP3-3-201ENST00000391586 704 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SSX3Q99909 PCNAP3-201ENST00000397222 778 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX3Q99909 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC6.46□□□□□ -1.38
SSX3Q99909 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX3Q99909 KRTAP9-11P-201ENST00000431013 525 ntBASIC6.46□□□□□ -1.38
SSX3Q99909 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC6.46□□□□□ -1.38
SSX3Q99909 SMYD1-202ENST00000438570 680 ntTSL 2 BASIC6.46□□□□□ -1.38
SSX3Q99909 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SSX3Q99909 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms