Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 SNX18P8-201ENST00000455120 874 ntBASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 GGTA1P-204ENST00000488429 1104 ntBASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 HNF1A-AS1-202ENST00000535301 536 ntTSL 4 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 AC144548.1-201ENST00000549577 324 ntBASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 DNM1P33-201ENST00000565222 270 ntBASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 AL365223.1-201ENST00000574864 1297 ntBASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 AC015674.1-201ENST00000578482 267 ntBASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 RN7SL473P-201ENST00000580341 299 ntBASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 MIR4682-201ENST00000580643 80 ntBASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 HCCAT5-202ENST00000642127 1029 ntBASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 GABRR3-203ENST00000621172 1521 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 AC018765.1-201ENST00000623357 3446 ntBASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.94□□□□□ -1.3
CCNB1IP1Q9NPC3 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 RNA5SP185-201ENST00000390963 114 ntBASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 SRI-202ENST00000394641 653 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 RN7SKP119-201ENST00000410753 273 ntBASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 RN7SKP168-201ENST00000410910 300 ntBASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 AL354983.1-201ENST00000434580 906 ntBASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 AC114755.4-201ENST00000439114 443 ntBASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 AC092447.7-202ENST00000443198 580 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 FO393419.1-201ENST00000443746 355 ntBASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 RN7SL180P-201ENST00000466769 294 ntBASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 GAPDHP31-201ENST00000509325 1014 ntBASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 AP001636.1-201ENST00000531997 1122 ntBASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 DNM1P34-202ENST00000567850 315 ntBASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 AC013731.1-201ENST00000604340 883 ntBASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 AL451054.3-201ENST00000611115 776 ntBASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 GSTTP1-204ENST00000621179 920 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 MIR3120-201ENST00000636555 81 ntBASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 TRAF6P1-201ENST00000429404 1558 ntBASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 EEF1A1P3-201ENST00000417549 1385 ntBASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 IRAK4-202ENST00000440781 1409 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNB1IP1Q9NPC3 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 ENO1P4-201ENST00000416471 1785 ntBASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCNB1IP1Q9NPC3 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms