Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL590682.1-201ENST00000437248 344 ntBASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AC123904.1-201ENST00000441072 368 ntBASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 RPL5P15-201ENST00000475870 897 ntBASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 FTH1P23-201ENST00000492727 550 ntBASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 RN7SKP242-201ENST00000515967 289 ntBASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 MTND6P19-201ENST00000519399 524 ntBASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 MIR4437-201ENST00000581331 60 ntBASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 RPS28P1-201ENST00000604589 187 ntBASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 NBPF8-201ENST00000583271 5330 ntBASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AC012360.3-201ENST00000610036 3449 ntBASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 AC009948.3-201ENST00000603415 1798 ntBASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 MAPK10-347ENST00000641762 2856 ntBASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 OR7E36P-201ENST00000419933 954 ntBASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 GAPDHP73-201ENST00000423411 1007 ntBASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 LINC00331-201ENST00000446391 376 ntTSL 5 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 MRPS21P1-201ENST00000453850 223 ntBASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 AL445187.1-201ENST00000502685 260 ntBASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 AC079768.1-201ENST00000503181 711 ntBASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 AC233724.1-201ENST00000503894 233 ntBASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 COX6CP11-201ENST00000555293 229 ntBASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 MIR5010-201ENST00000582846 120 ntBASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 AC007136.1-201ENST00000589141 199 ntBASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
NPIPA3F8WFD2 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC6.9□□□□□ -1.31
NPIPA3F8WFD2 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC6.9□□□□□ -1.31
NPIPA3F8WFD2 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC6.9□□□□□ -1.31
NPIPA3F8WFD2 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPIPA3F8WFD2 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPIPA3F8WFD2 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NPIPA3F8WFD2 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPIPA3F8WFD2 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPIPA3F8WFD2 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NPIPA3F8WFD2 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPIPA3F8WFD2 AL162456.1-201ENST00000634535 2006 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms