Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SLC7A5P2-201ENST00000553010 536 ntBASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 DUX4L2-201ENST00000561772 1275 ntBASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 DUX4L6-201ENST00000626483 1275 ntBASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 DUX4L1-201ENST00000627662 1275 ntBASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 DUX4L8-201ENST00000629013 1275 ntBASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 DUX4L3-201ENST00000630187 1275 ntBASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 DUX4L7-201ENST00000630678 1275 ntBASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 DUX4L5-201ENST00000630834 1275 ntBASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC13.94□□□□□ -0.18
UBE2D4Q9Y2X8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 AC091799.1-201ENST00000422823 811 ntBASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 AL136967.2-201ENST00000623968 743 ntBASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 AC004408.2-201ENST00000623613 2777 ntBASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2D4Q9Y2X8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 IRS3P-201ENST00000223076 1006 ntBASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms